Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07819 ATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCAACTCTAGCTCTGTATGCTGCGAAACGAACTTCTGGAATAGCTGTTAATATAGGTTTTCAAGTCACATCGGTAGTTCCAATTTTAAATGGAAAAGTAGTGCGCAAGGTGGGTGTGGAAGTTGTGGGACTGGGAGCATTGAAACTTACAGGATTTCTTAAGGAGAAGATGCAACTGAACAACATAAACTTTCAATCTTTGTACACTGTTCGCACATTGAAAGAGAAACTATGCTATGTTGCTCTTGATTATGAAGCTGAGCTATCAAAAGATACACAAGCATCATATGAAGCTATAGGAGAAGGATGGTTTACACTTTCAAAAGAGCGGTTTCAGACAGGAGAGATCTTATTCCAGCCACATCTTGCTGGAGTGCAAGCTATGGGTTTGCATCAGGCCATAGCTCTTTGTATGGAGCATTGCCATTCGGCAGACTTACCAGGTGACAATGATTGGTACAAGACCGTAGTTTTATCAGGGGGGACTGCATGTTTACCAGGCTTGGCAGAAAGGTTAGAGAAAGAACTTCATGCCTCACTTCCTCCTTACATGTCCAATGGAATTAGAGTCATACCTCCTCCATATGGTGCTGATACTCCATGGTTTGGAGCAAAGATTATTGGCAATTTGAGCACATTTCCCGGTCCTTGGTGTGTGGAAAAAAAGCAGTTTCGTCAGAAGCCTAGGCTCAGCCTCATATGGTGA 738 0.4309 MNVPAVCAVNQATLALYAAKRTSGIAVNIGFQVTSVVPILNGKVVRKVGVEVVGLGALKLTGFLKEKMQLNNINFQSLYTVRTLKEKLCYVALDYEAELSKDTQASYEAIGEGWFTLSKERFQTGEILFQPHLAGVQAMGLHQAIALCMEHCHSADLPGDNDWYKTVVLSGGTACLPGLAERLEKELHASLPPYMSNGIRVIPPPYGADTPWFGAKIIGNLSTFPGPWCVEKKQFRQKPRLSLIW. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07819 245 Gene3D - 12 210 - -
Seca4g07819 245 SUPERFAMILY Actin-like ATPase domain 21 229 IPR043129 -
Seca4g07819 245 SMART actin_3 1 235 IPR004000 -
Seca4g07819 245 Gene3D - 1 237 - -
Seca4g07819 245 Gene3D Actin; Chain A, domain 4 55 138 - -
Seca4g07819 245 PANTHER ACTIN 1 236 IPR004000 -
Seca4g07819 245 Pfam Actin 2 232 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07819 Seca-Chr4 180315362 180321862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07819 2 241 Cytoskeleton Gene Families AT3G12110 35.081 2.21e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07819 K16616 - gmx:100791973 454.907