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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca4g07814
ATGGGATGTGGTATGCAGTATGGACGATTTGAAAAATTGATAGAATTAAAATTGTCATTACTTTTCCCCTTTTGTCTATGTAGGGTTCCTACTCTAGGAGGAAAGCCACTAGATCTCTATCGCCTATTCATAGAAGTAACATCTCGTGGTGGTCTTGAAAAGGTGATTGTAGATCGTAAATGGAAGGATGTGATTCTGGCCTTCAGGTTCCCTGATACCATAACAAGTGCATCATTTATGGTGCGCAGATACTATCTTTCGTTGCTTTATCACTTTGAGCAAGTGTATTTTTTTCGGAAGCATGTCCCTCCTTCCTCAACACCTGCAGATAGTCCAGCACAGACACTTGGTTCTGTAGTGCATGGAACAATTGATGGGAAATTTGATTATGGATATGTAGTTACAGTTAATCTGGGTTCTGAAGAGCTAAAAGGTGTCCTGTATCATGTTCCTGATAATGTGTCCCGGAGTACTCATGCAGAAAGCACACCTAGTACGCAGAATCGAAAGAGATCAAGATTAGCATTACGTGATCCATCTCGGCCGAAATCAAACAGGAGTGGTTACAATTTCTTTTTCGCTGAGAATTATGCCAGGCTAAAGCCCTCGTTTTATGGGCAAGAGAGAGCAATTAGTAAGAGGATTGGGTTTCTGTGGAGCAATCTGACAGAAGCAGAAAGACAGGTTTATCAGGAGAAAGGGGTGAGAGATAAGGAAAGATACAAGACTGAAATGTTGGAGTACAAATCCAATAATTCAACTCCTCAACCTCAATAG
777
0.4106
MGCGMQYGRFEKLIELKLSLLFPFCLCRVPTLGGKPLDLYRLFIEVTSRGGLEKVIVDRKWKDVILAFRFPDTITSASFMVRRYYLSLLYHFEQVYFFRKHVPPSSTPADSPAQTLGSVVHGTIDGKFDYGYVVTVNLGSEELKGVLYHVPDNVSRSTHAESTPSTQNRKRSRLALRDPSRPKSNRSGYNFFFAENYARLKPSFYGQERAISKRIGFLWSNLTEAERQVYQEKGVRDKERYKTEMLEYKSNNSTPQPQ.
259
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca4g07814
258
Pfam
HMG (high mobility group) box
182
249
IPR009071
-
Seca4g07814
258
ProSiteProfiles
ARID domain profile.
3
97
IPR001606
GO:0003677
Seca4g07814
258
Gene3D
High mobility group box domain
164
256
IPR036910
-
Seca4g07814
258
PANTHER
HIGH MOBILITY GROUP B PROTEIN 9
28
256
-
-
Seca4g07814
258
SUPERFAMILY
ARID-like
26
110
IPR036431
GO:0003677
Seca4g07814
258
Pfam
ARID/BRIGHT DNA binding domain
28
93
IPR001606
GO:0003677
Seca4g07814
258
MobiDBLite
consensus disorder prediction
155
170
-
-
Seca4g07814
258
MobiDBLite
consensus disorder prediction
155
183
-
-
Seca4g07814
258
ProSiteProfiles
HMG boxes A and B DNA-binding domains profile.
182
249
IPR009071
-
Seca4g07814
258
SMART
hmgende2
181
250
IPR009071
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca4g07814
Seca-Chr4
180166645
180171394
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca4g07814
28
254
ARID Transcription Factor Family
AT3G13350
55.378
3.32e-94
278
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
ARID
Seca4g07814
HMG_box
6.1e-10
CL0114
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca4g07814
-
-
adu:107491521
356.681
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