Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07813 ATGGCAGTGAACTCGAACACTGAAATGGGAGCTCCTCTCTCCGACGCCAAGCCCCTAACTCCCTCACCACTACTCAAACCTAAATCTATTTTCTTACATGAATGGTGGCTTGTGAAGCCTCAACAGCAACGCGGGGGTTTAGCTGTTGGTGGCGTTACTTTCATGGAGAGGGAGAGAGTGTTTTTGTCTACAGTGATTGCAAAGAGGCTTGAGGCTAATGTCTTAGAGACTGAAGATGGCATCACAGTTAGTTTCCGTGGTTTCATTAACACCTCTCGTACATGTGAAAATGGCTTCCCATCTGTGGTACTCTATAATCTTTCAATGAATTTTGCTTATACCATTGTGTGTGTGTTAGTAATTCAATCCTCTAGAAATTATGCTTCTCTTTTTTCTTATATTCACCGCATTCATGGTTTTAAATTGTGGTCCAGAACCGCAATTGCAGTCACAATATTAAGGTTTTTTGAATCTCCACTATCGCAATTGTGGCCGCATCAGCTGCAATTGTCCACAATTTCCTGCAATTTCAATGATCACGATGCCACTGTCACTCACTGCAACCGCAATTTTTTAGTCTTTGATCGGGAATCCCCATAA 600 0.4233 MAVNSNTEMGAPLSDAKPLTPSPLLKPKSIFLHEWWLVKPQQQRGGLAVGGVTFMERERVFLSTVIAKRLEANVLETEDGITVSFRGFINTSRTCENGFPSVVLYNLSMNFAYTIVCVLVIQSSRNYASLFSYIHRIHGFKLWSRTAIAVTILRFFESPLSQLWPHQLQLSTISCNFNDHDATVTHCNRNFLVFDRESP. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07813 199 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 26 108 - -
Seca4g07813 199 Pfam SANTA (SANT Associated) 30 111 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07813 Seca-Chr4 180159297 180161494 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca4g07813 SANTA 6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07813 - - lja:Lj3g3v1932910.1 146.747