Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07809 ATGGCCCACGAATTCTACAATTGGTATGGTAGGTCGAATGGGTTCTCTGTTCATAAAAGCAATGTAGTATCGAATAGTAAGGGTGACATTTTGCAGGAAACATTTGTCTGTTCTACACAAGGACATAAAAGGGTTAGACGCTCCACAAGAAGTTCTAAAAAGAGACAACTGAAACCTCTGACGAGGTTTGATTGTAAAGCAACGTTCCGTGTTCACTTCAACATTAACTCAGGTCGATGGTATGTGACAATATTTGATGATAGACACAATCACAAAATGTTGGAAGAATAG 291 0.3883 MAHEFYNWYGRSNGFSVHKSNVVSNSKGDILQETFVCSTQGHKRVRRSTRSSKKRQLKPLTRFDCKATFRVHFNINSGRWYVTIFDDRHNHKMLEE. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07809 96 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 94 - -
Seca4g07809 96 Pfam FAR1 DNA-binding domain 4 94 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07809 Seca-Chr4 180033201 180033491 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g07809 FAR1 6.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07809 - K17604 mtr:112420123 109.768