Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07801 ATGGATTTGGGAACTGAATCTGTGGAAGAGAATGAAGTGAATCAGGATGGAAATGAAAACGGAACTGAAGGTGGCGGTTCTCTCGGTGACGAGAAATTAGGGTTGGGGTTCGATGGGAATTCGGATGCCAACACTTTAAAACCAGATCAAAAGGGAGAGGTTGTTGGTGTGGATAGTGAGGAAGCCGTGAATCCCAAAGTGACACCAACCAAAGGGTTTGGGTTGAAGAAATGGAAGAGAATTAGGAGGAATGTTGTTAAGGATCCCAATTCAAGTGCTGATTCGAGTAAAGTATTGAAGCGGGGATTGTCTGGTTCTGGCAATGCCAATTTGACTGAAAACCAACCTTATCTGCGTGATGTTAAGGAAAAAAATGACGGATCTTCAAATATGTTTGGGAATGTGGTGTTTTCTGATGGCAATGCGATCCATGGTTCTAGTTCAGATTCTAGATATGCACTTGGATCAGGTTTTGTTGTGGGGACTGATTCTGAGAATAGTGAGGATCGGAGTAGCAAGTCTTCCACGGCAGCTAGTGAGCCGAAGTTAAGGCACGAGAAAAGCCGTAGTAAGAATACAAATTCGAAGAATTTAGCCAACTTGGCTCAACGGGTTCAGCAGGGTAAAGGACGGGTTGAAAGCAGTAAGAAACCTGGAGGAGGTGCAAGAGTCAAAATTGAGAAGGAAAATTCTCTTTCCAGTATGGAATCTGATTCAAGGAGCTCCAACTTTAAGCAAGGTATCTCTACAGTTAGTAGTAATGGAAAGCATAGTGGTAAGCCATATGTTTACGATGGAGGTAACAGTGGTGAAGCTCACACTAATGAACATTTCACTGAGGGAGTTGAAGCCAGCTTTGGCAATGAAAACATGGGTGAAGATGAAGATCTTCTACCAGAGAATTTAGCTGCAAATTCGTCTTGGAATGTTGCAGAAGAAAAAAGTGAAAATAACCAATCTTCAACCATTGAAGATCCTTTAATTGAGTCTATTAGGAGCCTTCAGGCTGTCCAGGAAGCACTTGAAGAAGAAGTCCAGAAATTCAGGGAGATTGGGATTGAGGTTGTCTCACCAGATGATGACTCAGCCAACTGTAGCAGTGCATCTGCTGGTGTCACTGCTGTTGATCTTGGACTTCATAAGTCATTCTTATCTGGACATTCTGGTGCAGAAGAAGTTAAACAAACTGCTTCAAGTTCCTTAGAACTTAAGCTATTGAGCTTGACACAAAATATAAATATTTTGGAAAGCAAGTTGGAGGAATTACAGGGTATGCTTGCCCTGAAAGATTCCAGGATTGCTGAACTTGAAACAACCTTGAGTAGTGGTAAGTTTCCTAAGGAAGAATCTGCTAGCACAATAGGTTTATCAGAGGAAAAATGTAAAGAGGAAGAGTCTGAGCTCGAGGGCCTTTTTAGGCAAAGGATTGAAGCAGAGGTTGAATTCCTAGCCATCACAAAGGTGATGCAGAACTTGAAAGCCGGGGCAGATTTCCAACGCACATTATTGGAAGAACAAGAGAAACTGTCTGAAAATCAAGCACAGGTTCTCAACAAGGTCGTAGATGCAGAGAGTAAAGCTTCAGTGCTGAAGAACAAAGCAGAAGAGTTGGAAAAATATTATGGTGATAGTTTAGTACTTGAAGAATCTTTTGTGCTGCAGAAAAGAATGTGTAAGGTTACATTTTATCTTTTCGTAGAGTTCATGATGTTAATCTTGTTCTTTTGGTTTTTTGTGTCACAGTTATCGCTCAATTCTGGGGTCGTTGTACCCACATAA 1779 0.4154 MDLGTESVEENEVNQDGNENGTEGGGSLGDEKLGLGFDGNSDANTLKPDQKGEVVGVDSEEAVNPKVTPTKGFGLKKWKRIRRNVVKDPNSSADSSKVLKRGLSGSGNANLTENQPYLRDVKEKNDGSSNMFGNVVFSDGNAIHGSSSDSRYALGSGFVVGTDSENSEDRSSKSSTAASEPKLRHEKSRSKNTNSKNLANLAQRVQQGKGRVESSKKPGGGARVKIEKENSLSSMESDSRSSNFKQGISTVSSNGKHSGKPYVYDGGNSGEAHTNEHFTEGVEASFGNENMGEDEDLLPENLAANSSWNVAEEKSENNQSSTIEDPLIESIRSLQAVQEALEEEVQKFREIGIEVVSPDDDSANCSSASAGVTAVDLGLHKSFLSGHSGAEEVKQTASSSLELKLLSLTQNINILESKLEELQGMLALKDSRIAELETTLSSGKFPKEESASTIGLSEEKCKEEESELEGLFRQRIEAEVEFLAITKVMQNLKAGADFQRTLLEEQEKLSENQAQVLNKVVDAESKASVLKNKAEELEKYYGDSLVLEESFVLQKRMCKVTFYLFVEFMMLILFFWFFVSQLSLNSGVVVPT. 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07801 592 MobiDBLite consensus disorder prediction 235 257 - -
Seca4g07801 592 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 1 592 IPR044696 -
Seca4g07801 592 MobiDBLite consensus disorder prediction 216 234 - -
Seca4g07801 592 MobiDBLite consensus disorder prediction 1 71 - -
Seca4g07801 592 Coils Coil 331 351 - -
Seca4g07801 592 Coils Coil 405 439 - -
Seca4g07801 592 MobiDBLite consensus disorder prediction 84 269 - -
Seca4g07801 592 MobiDBLite consensus disorder prediction 193 209 - -
Seca4g07801 592 MobiDBLite consensus disorder prediction 160 178 - -
Seca4g07801 592 Coils Coil 461 481 - -
Seca4g07801 592 MobiDBLite consensus disorder prediction 88 115 - -
Seca4g07801 592 Coils Coil 520 540 - -
Seca4g07801 592 MobiDBLite consensus disorder prediction 127 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07801 Seca-Chr4 179703464 179709919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07801 - - gmx:100794612 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07801 4 179703464 179709919 Seca4g07801 4 179703464 179709919 ECH