Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07759 ATGACAAAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAGTTGCTACTGAATTGTTCAGAATATACTACAGCTATTGATATATGGTCGGTTGGTTGCATTTTAATGGAGATAATTAGAAGGGATCTTTTATTTCCTTGTAAAGATCATTATGTTCAGCAGTTGGCGTTCATAACTGATTTACTAGTAGGCATAACCATTATTTTAGGTCTAGCTTTGACGGTTGCTACATATTCAGTTGGTCATGTCTCTGGTGGCCATTTCAATCCTGCAGTCATAATTGCCCTGACTGTTGTCTAA 300 0.38 MTKYVVTRWYRAPELLLNCSEYTTAIDIWSVGCILMEIIRRDLLFPCKDHYVQQLAFITDLLVGITIILGLALTVATYSVGHVSGGHFNPAVIIALTVV. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07759 99 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g07759 99 Gene3D Transferase(Phosphotransferase) domain 1 6 62 - -
Seca4g07759 99 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 62 - -
Seca4g07759 99 SUPERFAMILY Protein kinase-like (PK-like) 1 61 IPR011009 -
Seca4g07759 99 SUPERFAMILY Aquaporin-like 62 98 IPR023271 -
Seca4g07759 99 Pfam Major intrinsic protein 61 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca4g07759 99 Pfam Protein kinase domain 1 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07759 Seca-Chr4 178331691 178331990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07759 1 62 MAP Kinase Gene Family AT1G07880 80.645 4.02e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca4g07759 MIP 6.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07759 K04371 - zju:107411133 108.997