Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07746 ATGTGCAAGGTCAAGGGTGAGGATTTCACATGGCACATAAGCAATGTTGAGACATGGGTCAGCTCTGCTTTGACTGATGAAAGCACTTGCAGTGATGGGTTTGCTGGGAAGGCACTTAATGGAAAAATCAAGGCTTCTATTAGAGCTAGAATGGTGAATGTTGCTCAGGTCACTAGTAATGCTCTTTCACTCATCAACCAGTATGCTGCAAATCACTAG 219 0.4384 MCKVKGEDFTWHISNVETWVSSALTDESTCSDGFAGKALNGKIKASIRARMVNVAQVTSNALSLINQYAANH. 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07746 72 Gene3D Invertase/pectin methylesterase inhibitor family protein 3 68 IPR035513 -
Seca4g07746 72 CDD PMEI-like_3 1 70 - -
Seca4g07746 72 NCBIfam pectinesterase inhibitor domain 10 68 IPR006501 GO:0004857
Seca4g07746 72 Pfam Plant invertase/pectin methylesterase inhibitor 7 64 IPR006501 GO:0004857
Seca4g07746 72 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 68 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07746 Seca-Chr4 177771144 177771362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07746 12 65 Carbohydrate Esterase AT1G53830 35.185 8.62e-07 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07746 - - gmx:100305900 139.813