Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07743 ATGGAAGCCAACACTTTTGCAAGCCCAGTTTCTCACCAGGTTCTCACAATTGTTATTTTCATCCTTCTAGCTATATCTAGCACAAGTTCAGCATGCAATAATTCTACCATCCCTTCCACCAATTCCACCAATACCAACTTTATAAACACTCCCATTCCTTCCAATTCCACCCAAACCAATAACTATGAAAACACCACCATTCCTTTCAATTCCACCCAAACCTTCAGAACCTACATTAAAACCTCTTGCAATTCAACCACATACCCATCCATATGCTACCAATCATTATACCCCTATGCTTCCAAAATTGAAGCAAATCCAATGAAGCTCTGCAATGTCTCTCTCTCCCTGGCCTTAAAGGCAGCTCAGAGTGCATCCTCAACCATAACAAAGCTTCTGAAGAGCAATAATAATTTGACAGGCAAAGCAGAACAAGTTGTGAAAGATTGCTTTGGCAATGTCAAGGACTCAATAGAACAATTACAGGACTCTCTTGATGCTATGGAACATTTGGATGCCATTGATAGAGAGTTTCAGATTAGCAATGTGAAGACTTGGGTCAGTGCTGCTATCACCAATGATCAAACGTGCTATGATGAATTTGATGAGATGGGAGTGGATGCCACCGTGAGGGACAGAATCAGAAAGAGTGTTTTGAATGTGGCAAGGATGACTAGTAATGCTTTGTATTTCATCAACAATAACATATACTAA 714 0.402 MEANTFASPVSHQVLTIVIFILLAISSTSSACNNSTIPSTNSTNTNFINTPIPSNSTQTNNYENTTIPFNSTQTFRTYIKTSCNSTTYPSICYQSLYPYASKIEANPMKLCNVSLSLALKAAQSASSTITKLLKSNNNLTGKAEQVVKDCFGNVKDSIEQLQDSLDAMEHLDAIDREFQISNVKTWVSAAITNDQTCYDEFDEMGVDATVRDRIRKSVLNVARMTSNALYFINNNIY. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07743 237 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 235 IPR035513 -
Seca4g07743 237 SMART PMEI_2 74 231 IPR006501 GO:0004857
Seca4g07743 237 FunFam Pectinesterase inhibitor 3 74 235 - -
Seca4g07743 237 NCBIfam pectinesterase inhibitor domain 72 234 IPR006501 GO:0004857
Seca4g07743 237 Pfam Plant invertase/pectin methylesterase inhibitor 78 229 IPR006501 GO:0004857
Seca4g07743 237 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 230 - -
Seca4g07743 237 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 234 IPR035513 -
Seca4g07743 237 CDD PMEI-like_3 81 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07743 Seca-Chr4 177592040 177592753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07743 79 234 Carbohydrate Esterase AT3G14310 29.560 4.01e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07743 - - gmx:100527443 292.737