Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07733 ATGTCTCTGTTTGCAAGAAATGTTCCCCTGTTGTGGGTGCTTTTACTCCTATCAACTAGCAGCGCTCTTGGATCAAGAGTACTAACAACGCATGTGAAGGTCACAAATATTTTGGGTGTGTTGGATTTGAACCTTCACTGTAGATCTGGGAATGAGGATCTTGGATTGCGAATTCTCCATCCTGGTGGTTACTTTGAATGGAGTTTTGATCAGACAGGGCAGCCGTTCAAAATATACACATGTTCCTTTCAATGGCGAGGTGCCTCTCACTTGTTTGATATATACAAAGCAGGTAGGGATTCTGTTTGTGAATCATGTGTTTGGTATATTAAGCAGGATGGACCATGTAGGTATATACCTCTTTTTCATAAATATGTTTGCTATGCCTGGAAAGCCTAA 399 0.411 MSLFARNVPLLWVLLLLSTSSALGSRVLTTHVKVTNILGVLDLNLHCRSGNEDLGLRILHPGGYFEWSFDQTGQPFKIYTCSFQWRGASHLFDIYKAGRDSVCESCVWYIKQDGPCRYIPLFHKYVCYAWKA. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07733 132 PANTHER - 29 118 IPR010264 -
Seca4g07733 132 Pfam Plant self-incompatibility protein S1 31 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07733 Seca-Chr4 177364810 177365208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07733 29 132 Carbohydrate Esterase AT3G16970 34.545 8.07e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07733 - - pvu:PHAVU_011G171500g 98.5969