Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07727 GGAGAACAACCCTGTAACCCTAGCCCGCACCTTGAGTCGCCGCCCCCACAATCAGGAGGAAGAGTTACTGCACGCAGGGATTGTCCCAAGCCCCGCCGCATCACAGTCGTCGTCCTCGCATCGATCGTGTCAATTTCGTCGCAAGCACCAGCGTCACACCAGTTTCAACGGACCACCGCATCTGTTCGCACCCCGTCTCGCCGTCACTGCATCCTAGTCATAGGCACTGAAAAAATATCTTCTACTGCATCAATTTTGACTTGGTTAGGCATTGCATGCAAGTTGGGAACTGAGGCATTCAAGACACCAAGATCAGTTAGGGCCCTGTTCAAGGACCCCTGCATACGGCTTGCAGCAAAGGTATCCAAAGAACTATCCACAAGGTCTCGAAAGCTCTATCCACAAGGTATCCAAAGCACTATCCACAAGAAGGGGGAGATCATAGTTTGCTTTGGAAAGTCAGGTATTCATGGATGGGGCCTCTTTGCCTGTAGAGATTTGCAAGAAGGAGAAATGGTTATTGAGTATCGTGGGGAGCAACATGTAAGGCACAGTGTTATTGATCTGAGGGAAGTGAAATACCGTTCAGAAGGCAAAGATTGTTATGTGAGTCTCTTGTTTCAGATTGTTTTCAGTCGTTCATACTTAGTCTTCAAAAGAATTTATCTGGCCATAATACTATGGGACAATCACTTTATGAAACACTATTTGTTTGGAATGAGTTCTTAA 729 0.4678 GEQPCNPSPHLESPPPQSGGRVTARRDCPKPRRITVVVLASIVSISSQAPASHQFQRTTASVRTPSRRHCILVIGTEKISSTASILTWLGIACKLGTEAFKTPRSVRALFKDPCIRLAAKVSKELSTRSRKLYPQGIQSTIHKKGEIIVCFGKSGIHGWGLFACRDLQEGEMVIEYRGEQHVRHSVIDLREVKYRSEGKDCYVSLLFQIVFSRSYLVFKRIYLAIILWDNHFMKHYLFGMSS. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07727 242 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g07727 242 SUPERFAMILY SET domain 147 231 IPR046341 -
Seca4g07727 242 Gene3D SET domain 100 217 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07727 Seca-Chr4 177041907 177043468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07727 95 126 Miscellaneous Gene Families AT4G17970 68.750 4.85e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca4g07727 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07727 - - dct:110094707 103.605