Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07669 ATGGTGCCCTTTGTTTTGCCTCTTCTATTCTTCTCATTCTTAGTGGGGAATTCGAAAGAACAACTCCAAGTGGGTTTCTATTCCAACACATGTCCTCAAGCAGAGCCCACTATTCATGTTGTTGTTAGAGATGTTGTTCTCTCTGAGCCTAACATGGCTGCTATCTTGCTCAGGCTTCAGTTTCATGATTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATCGACAATGGTCCACAATCAGAGAAACTAGCATTTGCACATCAATGGGTTAGGGGGTTTGGAGTAATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTGCCCAGGAGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCCAGAGATGCCATAGTCATGGCAAATAGACCAGGATACCAAGTTCCAACGGGGAGGAGAGAAGGGTTGGTTTCTAATCTTTCACTTGAAACTGATATGACATATGTTGATGATTCAATTCAACTACTCAAGGACAAGATTCTGAAGAAGGGTCTCACAGAGAAAGACCTTGTCCTTCTCAGTTGTACACACTTAAGGACAGGATTCATCAAGGGAACTCCACTGCTTAAACTTAGATAG 603 0.4328 MVPFVLPLLFFSFLVGNSKEQLQVGFYSNTCPQAEPTIHVVVRDVVLSEPNMAAILLRLQFHDCFVEGCDGSILIDNGPQSEKLAFAHQWVRGFGVIERAKAQLEASCPGVVSCADIVALAARDAIVMANRPGYQVPTGRREGLVSNLSLETDMTYVDDSIQLLKDKILKKGLTEKDLVLLSCTHLRTGFIKGTPLLKLR. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07669 200 SUPERFAMILY Heme-dependent peroxidases 21 185 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Seca4g07669 200 PANTHER PEROXIDASE 25-RELATED 11 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 FunFam Peroxidase 25 166 - -
Seca4g07669 200 Pfam Peroxidase 41 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 Gene3D Peroxidase, domain 2 155 185 - -
Seca4g07669 200 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 ProSiteProfiles Plant heme peroxidase family profile. 21 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07669 200 Gene3D - 25 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07669 Seca-Chr4 174710213 174711081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07669 6 191 Peroxidase AT4G25980 62.366 1.81e-79 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07669 K00430 - gmx:547549 277.715