Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g07638 | ATGACTGGTGTCCTTGTTGTGAGCTCAAGATGTTGGCCTCAAATTTCTCGTTATAGAGCTGCCGTTCGCACTCAGTCATCCAAAGTTGAGATGATTGCATCTCTATTTAAGCTTGTTTCTGGTAACAAGGATGATGGTATCATAAGGGAGTTGCTTTTGGACTTTTACCGGAGTTCAAGACAAACCAAGCCTGAACATATAATAATTTTCAGGGATGGAGTGAGTGAATCACAGTTCAACCAAGTCCTGAACATTGAATTGGATGAAATCATTAAGGAACTGTCATTGACAACAATATTTGTGATCCCAAAAACAATGACTTCTACATGTGTGCTCATGCTGGGAAGATTGTATTATAACTGCTATATCATTGCCCCCGTTTACTATGCTCACTTGGCAGCTGCTCAGATGGTCCAATTTATAAGTTTGATGAAATGTCTGATACTTCTGACATCTGTTGGTGTACCTCAAGTTCCTCAACTACCCCGCCTTCACCAAAATGTCATTAACTCCATGTTCTTCTGTTAA | 528 | 0.3996 | MTGVLVVSSRCWPQISRYRAAVRTQSSKVEMIASLFKLVSGNKDDGIIRELLLDFYRSSRQTKPEHIIIFRDGVSESQFNQVLNIELDEIIKELSLTTIFVIPKTMTSTCVLMLGRLYYNCYIIAPVYYAHLAAAQMVQFISLMKCLILLTSVGVPQVPQLPRLHQNVINSMFFC. | 176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g07638 | 175 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 6 | 94 | - | - | |
Seca4g07638 | 175 | Pfam | Piwi domain | 6 | 94 | IPR003165 | GO:0003676 | |
Seca4g07638 | 175 | SUPERFAMILY | Ribonuclease H-like | 14 | 99 | IPR012337 | - | |
Seca4g07638 | 175 | Gene3D | - | 2 | 175 | IPR036397 | GO:0003676 | |
Seca4g07638 | 175 | ProSiteProfiles | Piwi domain profile. | 52 | 94 | IPR003165 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g07638 | Seca-Chr4 | 174224092 | 174226485 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g07638 | 6 | 92 | Eukaryotic Initiation Factors Gene Family | AT5G43810 | 45.055 | 3.36e-16 | 73.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g07638 | K11593 | - | vvi:100260151 | 137.887 |