Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07629 ATGTCATCCTTCAAATCCTACGGGAAAGTTGATGAACACGAGCAAATGGTGTTGGAAGCCAAGAGGAAAACACGAAAGAGAATCACAATCATAAGCTTGTCCACAATAATCCTCGCTGGGGTTGTATTTGCTGCTGTATTTGGAATCGTTAGCAACTCTAGTGACAACTCACAAAGTGGAAATGCTCCTCAATCTGTGGCCAATTCAGTGAAGGCTGTTTGTGATGTGACACTGTATAAGGACTCATGTTACAGAAGCCTTGGCTCTGTTGTGGACTCTGCAGGCCAGGTTCAGCCTGAGGAGCTGTTCAAGTTGTCCATTAAAGTGGCCTTAACTGAAGTGTCTAAAGCTGATGAGTATTTCAGTGAGCATGGAGTTTTCAAAGGCTTGAATACTGATAGCAGGACTAAAGAAGCTTTGAAAAATTGCAGGGATCTTTTGGATCTTGCAGTTGATCACTTAAATAGCACTTTGATTTCTGGAGAAAATTCTTCCCTTCTTGACGTTTTTGAAGATCTTCAAACATGGTTAAGTGCTGCAGTGTATGCTGAAATAGGAACATACCAGCAGACATGCATTGAAGGCTTTGAGGATGCAAAAGAAGCACTGAAGGCAAGTGTAGTAAGCTATCTTAAAAACTCTACAGAATTCACCAGCAACAGTCTTGCCATCATAACCTGGATTAACAAGGCTACAAGCACACTGAACTTGAGGCGCTTACTGAGTTTACCTTATCAGAATGAAGCACCGGAATGGCTTCATTCAAAAGACAGGAAGCTTCTTAGAACACAGGATTTGAAGTGGAAAGCTGATATTGTTGTGGCCAAAGATGGAAGTGGGAAATATAAAACTATTTCTGCTGCACTTAAGCATGTTCCTAATAAGAGTAACAAGAGGACTGTGATCTATGTGAAGAAAGGGATTTACTATGAAAATGTGAGGGTAGAGAAGACCAAATGGAATGTGGTGATGATTGGTGATGGAATGACTGCTACACTTGTATCTGGCAGGCGTAACTTTGTGGATGGCACCCCAACATTTTCAAGTGCAACATTTGCTGTGTTTGGAAGGAATTTCATAGCTAGAGACATGGGGTTTCGCAACACAGCTGGTCCTCAGAAGCATCAAGCAGTAGCACTGATGACAAGTGCTGATCAAGCAGTGTACTATAGGTGTCACATTGATGCATTTCAAGACACTCTCTATGCTCATTCCAATCGCCAATTTTATAGAGAATGCAACATCTATGGGACAGTTGATTTCATTTTTGGCAATTCTGCAGTTGTGATCCAAAACTGCAATATTTTTCCAAAGTTACCTATGCATGGCCAGCAGAACACAATCACAGCACAGGGAAAATTTGACCCTAACATGAACACAGGGATCTCAATTCAAAATTGCAACATTTTACCCTTTGGGAACTTGAGTACTGTCCAAACATACCTTGGAAGACCCTGGAAGAATTACTCAACTACAGTGTACATGAGATCCAGAATGGAAAGTTTTATTAACCCAAATGGCTGGTTACCATGGGTTGGGAACTCAGCACCAGACACCATTTTTTATGCAGAATTTCAGAATGTTGGTCCAGGTGCTTCAACAAAGAATAGGGTGAAATGGAAGGGTTTGAGAACCATTACTAGTAAACAAGCCAACAAGTTTACAGTCAAGGCTTTTCTTCAAGGAGATAGATGGATTCCTGCATCAGGTGCACCCTTTAAGTCTGATCTGTGA 1734 0.4135 MSSFKSYGKVDEHEQMVLEAKRKTRKRITIISLSTIILAGVVFAAVFGIVSNSSDNSQSGNAPQSVANSVKAVCDVTLYKDSCYRSLGSVVDSAGQVQPEELFKLSIKVALTEVSKADEYFSEHGVFKGLNTDSRTKEALKNCRDLLDLAVDHLNSTLISGENSSLLDVFEDLQTWLSAAVYAEIGTYQQTCIEGFEDAKEALKASVVSYLKNSTEFTSNSLAIITWINKATSTLNLRRLLSLPYQNEAPEWLHSKDRKLLRTQDLKWKADIVVAKDGSGKYKTISAALKHVPNKSNKRTVIYVKKGIYYENVRVEKTKWNVVMIGDGMTATLVSGRRNFVDGTPTFSSATFAVFGRNFIARDMGFRNTAGPQKHQAVALMTSADQAVYYRCHIDAFQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIFPKLPMHGQQNTITAQGKFDPNMNTGISIQNCNILPFGNLSTVQTYLGRPWKNYSTTVYMRSRMESFINPNGWLPWVGNSAPDTIFYAEFQNVGPGASTKNRVKWKGLRTITSKQANKFTVKAFLQGDRWIPASGAPFKSDL. 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07629 577 Gene3D - 266 577 IPR012334 -
Seca4g07629 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 229 IPR035513 -
Seca4g07629 577 Pfam Plant invertase/pectin methylesterase inhibitor 69 224 IPR006501 GO:0004857
Seca4g07629 577 CDD PMEI-like_3 72 230 - -
Seca4g07629 577 Pfam Pectinesterase 271 563 IPR000070 GO:0030599|GO:0042545
Seca4g07629 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 228 IPR035513 -
Seca4g07629 577 SMART PMEI_2 65 224 IPR006501 GO:0004857
Seca4g07629 577 FunFam Pectinesterase 265 577 - -
Seca4g07629 577 SUPERFAMILY Pectin lyase-like 269 574 IPR011050 -
Seca4g07629 577 ProSitePatterns Pectinesterase signature 2. 415 424 IPR033131 -
Seca4g07629 577 FunFam Pectinesterase 66 229 - -
Seca4g07629 577 PANTHER PECTINESTERASE 39 567 - -
Seca4g07629 577 NCBIfam pectinesterase inhibitor domain 45 228 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07629 Seca-Chr4 173903601 173906023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07629 7 577 Carbohydrate Esterase AT3G10710 56.870 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07629 - - gmx:100811152 963.37