Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07588 ATGGAGAATTTGACCATAACCTCCATCTCCAAGAGACAAATTGGGAGGCCACTTAGCTCCAAGAATAAGCCCAAGCCAACCATCCCCATCAAAAAAGGCAACGACCAACTCTTCAAAAAGATCATCATTGAAATTCCTGTAGGACACGATGTTATTGATGTCCTCTCCGGGTACGCTAATCACCTTTTTGTCGGCATCTCGGTGTTGAGTGTGGTGGGTTATGTATTTGATGTTACCCTTCACCGCCCTTTATGTCGTCTCTAA 264 0.447 MENLTITSISKRQIGRPLSSKNKPKPTIPIKKGNDQLFKKIIIEIPVGHDVIDVLSGYANHLFVGISVLSVVGYVFDVTLHRPLCRL. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07588 87 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 83 IPR014476 GO:0003680
Seca4g07588 87 MobiDBLite consensus disorder prediction 1 17 - -
Seca4g07588 87 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07588 Seca-Chr4 172530634 172530897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07588 9 83 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.333 2.74e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07588 - K03440 lang:109356348 63.1586