Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07584 ATGGACTTTAATAGTGATGATTCAGCTGTTAATCTGGATGATGATAGGGACATAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGAAATGATATACATAGTGATGAGGGAAATGAGTCTATTCATCCAGAGGCTGATATGGATAAGGAGAATGATGTTATGGATACTTATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAATGATGATATAAGGGCTTTGGAGTTCGCTAGTGAAAATCATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTAAAGGATTTTCTATGAGGAAGGATGATGTTATTCGAGACAAAAAAGGTATGGTCATAATGCGGCAATATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACACAGATCCCTTACCCGTGCCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGAATTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGTTTTTTTTTCAAGATTTTTATGTTTGA 834 0.3669 MDFNSDDSAVNLDDDRDISYSDSSSSHEMTSGNDIHSDEGNESIHPEADMDKENDVMDTYVRDGVSRRIIDLTNDDIRALEFASENHAFNFYFSYAKCKGFSMRKDDVIRDKKGMVIMRQYLCSRAGMRDKKHLIRLDRKKEHRSLTRANCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDQKGGYRNVGISKKDLYNYIDEVKRGKIKDGDVVAGLSYLQGKADNNPMFFFQDFYV. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07584 277 MobiDBLite consensus disorder prediction 32 55 - -
Seca4g07584 277 Pfam FAR1 DNA-binding domain 90 180 IPR004330 -
Seca4g07584 277 MobiDBLite consensus disorder prediction 1 55 - -
Seca4g07584 277 PANTHER OS01G0519700 PROTEIN 80 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07584 Seca-Chr4 172450563 172451396 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g07584 FAR1 1.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07584 - - ccaj:109794460 282.722