Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07532 ATGAGTGAAGAGAACCAATTGGATGTGAGGGGACAAAATTTTCAGTTAATGCCATTTGGGACAGGAGGAAGAGTGTGTCCTGGTGCCTCACTTGCACTTCATGTTGTTCCCATTAATCTTCCAGCTATGGTTCAGTGTTTTGAATGGAAGGTTGATGGGACAGTAAACATGGAAGAGAAACCAACCATGACCCTTCCAAGGGCTCATCCTTTGGTTTGTGTCCATGTGCCTCGCTTTAATGGCATTTCTTCAAGCATATAG 261 0.4406 MSEENQLDVRGQNFQLMPFGTGGRVCPGASLALHVVPINLPAMVQCFEWKVDGTVNMEEKPTMTLPRAHPLVCVHVPRFNGISSSI. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07532 86 SUPERFAMILY Cytochrome P450 5 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g07532 86 Gene3D Cytochrome P450 2 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g07532 86 PANTHER CYTOCHROME P450 82C3-RELATED 3 79 - -
Seca4g07532 86 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 19 28 IPR017972 GO:0005506|GO:0016705
Seca4g07532 86 Pfam Cytochrome P450 8 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07532 Seca-Chr4 170939281 170939541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07532 3 78 Cytochrome P450 AT4G31940 47.436 7.88e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07532 K24188 - gmx:100805931 134.42