Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07518 ATGTTAGGTGAAGCAACTGATAGTTGTAATGCCTATGGTTTTGGTATTCTCCTTCTAGAACTTGCCACTGGTAGAGAACCATTTCAAAAACATAGTTCCATAGCGAAGCAATCAGTGGTTCATTGGGCGTTGCTATTGGTTTGTAATAATTTATCCAAACAATGTCTACATGGTAACTATTTGGAGGAAGAGCTTAAAAGAGTTATTAATGAAATCCAAAGGGAACGTTCCAACTTGGATCAATCGACATATTCAGTGTTTAAACGATATTATTTATATTCCTTCATTATCTAA 294 0.3469 MLGEATDSCNAYGFGILLLELATGREPFQKHSSIAKQSVVHWALLLVCNNLSKQCLHGNYLEEELKRVINEIQRERSNLDQSTYSVFKRYYLYSFII. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07518 97 Gene3D Transferase(Phosphotransferase) domain 1 1 86 - -
Seca4g07518 97 SUPERFAMILY Protein kinase-like (PK-like) 5 63 IPR011009 -
Seca4g07518 97 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07518 Seca-Chr4 170323049 170323342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07518 3 69 Trihelix Transcription Factor Family AT1G68690 34.667 8.11e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07518 - - ini:109165192 80.1073