Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07516 ATGGCCACCGAAAAGCTTAGATGTGGAGCAAAATTCCTTGAGAACTCTAAGCATTACTTTGCCATGATTGCTTTACAATTTGGGTATGCAGGCATGAACATCATCACCAAAGTTTCCCTCAACCGTGGCATGAGCCACTATGTCCTCGTTGTTTATCGCCATGCCTTTGCAACTGCTGCCATCGCTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAAGATAACATTCCCAATTTTCATACAAATTTTCATCCTGGCTCTTCTTGGGCCTGTGATAGATCAAAACTTCTACTATGCTGGGTTGAAATTAACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCTGCCATGACTTTTGTGATGGCAGTTTTATGCCGGATGGAAAAGATCAACATGAAGAAAGTGAGGTGCCAAGCAAAGGTGGTGGGAACTATAGTAACGGTGGCTGGGGCCATGTTGATGACCTTGTACAAAGGTCCTATTGTGGAAATGGTGTGGACCAAACATGCACCTCATAGTAAAACCAATGCAACACACACCACAAGATCTTCAGACAGGGATTGGTTCATAGGCTCCATCTTACTAATCATTGCCACATTTGCCTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCCATAGAAACGTACAAGAATCATCAGCTGAGCCTCACATCACTTATATGCTTCATAGGCACGCTTCAAGCTATTGCTGTTACTTTTGTTATGGAACACAAGACTTCAGCGTGGACAATTGGTTGGGATATGAACTTACTAGCAGCTGCCTATGCTGGGATTGTTACATCAAGTATATCATACTACGTTCAAGGGTTGGTGATTAAGAAGAAAGGGCCTGTTTTTGCAACTGCATTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCCTTCATCCTTGCTGAGCAGATTTTCCTTGGAGGTGTTCTTGGTGCCATCTTGATTGTCATAGGCTTATACTCTGTTTTGTGGGGAAAGCACAAAGAGCAAGTGGAAAACAAAGTGGCAGAGGATACACCCTTGCCTGTAAAGGGTGCTCAGGTTGATGGAAATCCAGGGATACATACTGATTCCACTAATCAATTTGATGAAACAAAATCAAATCAGAAAATAGAACCCAACAAGCTCTCTTCAGTTGCCATCAGCATGCCTAACTCAGAGCCTCCCATGAAAGCTAACCAATAA 1215 0.4321 MATEKLRCGAKFLENSKHYFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAFIFERKAQPKITFPIFIQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTIVTVAGAMLMTLYKGPIVEMVWTKHAPHSKTNATHTTRSSDRDWFIGSILLIIATFAWASLFVLQAKAIETYKNHQLSLTSLICFIGTLQAIAVTFVMEHKTSAWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIFLGGVLGAILIVIGLYSVLWGKHKEQVENKVAEDTPLPVKGAQVDGNPGIHTDSTNQFDETKSNQKIEPNKLSSVAISMPNSEPPMKANQ. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07516 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 338 - -
Seca4g07516 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Seca4g07516 404 MobiDBLite consensus disorder prediction 351 404 - -
Seca4g07516 404 PANTHER WAT1-RELATED PROTEIN 19 345 IPR030184 GO:0016020|GO:0022857
Seca4g07516 404 MobiDBLite consensus disorder prediction 362 404 - -
Seca4g07516 404 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Seca4g07516 404 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07516 Seca-Chr4 170230970 170234660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07516 1 401 Nodulin-like Gene Family AT5G07050 67.076 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07516 - - gmx:100804359 654.055