Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07494 ATGGCTCCAGAATATGTTCAAACAACTAGAGTCAATGAAAAGATTGATGTCTATAGCTTTGGGGTTATCTTATTGGAATTGAAAACCGGTAAAGAAGCTAATTATATGGAGATGAACACTCATCTCTAG 129 0.3488 MAPEYVQTTRVNEKIDVYSFGVILLELKTGKEANYMEMNTHL. 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07494 42 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
Seca4g07494 42 ProSiteProfiles Protein kinase domain profile. 1 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g07494 42 PANTHER OS08G0249100 PROTEIN 1 33 IPR046958 -
Seca4g07494 42 Pfam Protein tyrosine and serine/threonine kinase 1 40 IPR001245 GO:0004672|GO:0006468
Seca4g07494 42 SUPERFAMILY Protein kinase-like (PK-like) 1 32 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07494 Seca-Chr4 169210095 169210349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07494 1 42 Receptor kinase-like Gene Family AT5G25930 61.905 2.09e-12 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca4g07494 PK_Tyr_Ser-Thr 2.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07494 - K00924 gmx:100819744 67.781