Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07471 ATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGCGGAGAGAAGGGCCAGCTTGCACCATTTAATAGTGACTTGTTTGAACAAGTAGTTGCAGAATGCAGTCAACATCACCTTGAGCTTCAGTCCTTGATAAGGAAGATACAGGAGGAAGGTTTGGATGTCCAAACGGCTAGAAATGCAGATCACTATGGAGCCCTCATCCACCATCTTTCATTAGTCCGAAATAAACGTTGCCTAATGGCCTATATGTATAATCGAGCAGAAATTATACGGAGCTTGTTATGGAAGATAGGGCATGTGCTTCCTCAAGAAATTGAAGAGAAGCTTTGTCATTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCAGCATTGAAATCTTATATGTCAAAACTTCTGGTTGATCTGACTGTGGATATGGTACCACCAAAAGATCCTTACATCCAAGTAAGGGTCCTTGAAGACATAGGAGAAGGCATTGTACTCAGTGATGATAAGACTGCCAATTTTGCCCGCCATTCAATGCACTTTCTGAAACGAACTGATGCCGAGCAATTTATCGCACGAGGCTTAATGGAGGAGCTCACAGGTTGA 600 0.4233 MYGRKACQLVKEFASGEKGQLAPFNSDLFEQVVAECSQHHLELQSLIRKIQEEGLDVQTARNADHYGALIHHLSLVRNKRCLMAYMYNRAEIIRSLLWKIGHVLPQEIEEKLCHSEEEYFKKHSAALKSYMSKLLVDLTVDMVPPKDPYIQVRVLEDIGEGIVLSDDKTANFARHSMHFLKRTDAEQFIARGLMEELTG. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07471 199 PANTHER PARTNER OF SLD5 1 198 IPR005339 GO:0000811|GO:0006260
Seca4g07471 199 FunFam DNA replication complex GINS protein PSF1 1 134 - -
Seca4g07471 199 Pfam GINS complex protein 31 116 IPR021151 -
Seca4g07471 199 CDD GINS_B_Psf1 148 197 - -
Seca4g07471 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Seca4g07471 199 Gene3D - 1 134 - -
Seca4g07471 199 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07471 Seca-Chr4 168522471 168528799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07471 1 199 Core DNA Replication Machinery Family AT1G80190 71.782 4.42e-108 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07471 K10732 - qsu:112021696 352.058