Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07456 ATGGCAGCAGTGGCATCTCAGGTAGTGAAAGATAATGGTCTCTGGCTAAGTAAAAGTCAAAGTGGAGTCAATGGCCTCCAAAATGGAGTCATAGAAGTGGTTCATGGCATGGTTGAAGAGATTGACAAAACTGTTGAACTTCAACCTCACAGTGTTGATGTATTGTTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCGCGAGACCGATGGTTGAAGCCTGGAGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCATTTTGGGAGAATGTGCATGATTTTGACATGTCTTGCATAGGGAAGGAGCTTGTCACAGATGCTGCCCAAATTCCTATAGTTGATGTTGTAGACCATCAAGATTTAGTTACCAATTCTGCGATTCTTCAGAACTTTGACTTGGCTACCATGAAGCCCAATGAAGTGGATTTCACTGCAACTGCTACTCTAGAACCAAAATTGAATGCTTCAGAAGAAAAAACACATTTGAATACTAAAACATGCTGCTGGTGTTATGGAGTTGTCCTATGGTTTGAAACTGGATTTACAAGTAGATTTTGCCGGGAAACACCAGCTGTGTTATCCACATCTCCTTACACTCCAAAGACACATTGGTCTCAAACAATCTTAACTTTTCGGGAACCCATTGCCATAGGATTTGCAAAAGAAATTGGAAAAAGAAAAGCGGAAGCAATTGGCACTGAAGCCTACCCTGCTGTGAAGATTGATTTGCGTGTCAGCATTGTTCGGTCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTGCAGGCGTTGGTCCTGATGGTCGGAGATGCAGTTGGCCTGCACAGCTTTTTTCTCTGCAGTAG 912 0.4298 MAAVASQVVKDNGLWLSKSQSGVNGLQNGVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGGTSLPFWENVHDFDMSCIGKELVTDAAQIPIVDVVDHQDLVTNSAILQNFDLATMKPNEVDFTATATLEPKLNASEEKTHLNTKTCCWCYGVVLWFETGFTSRFCRETPAVLSTSPYTPKTHWSQTILTFREPIAIGFAKEIGKRKAEAIGTEAYPAVKIDLRVSIVRSTEHRSIDISLEAAGVGPDGRRCSWPAQLFSLQ. 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07456 303 Gene3D Vaccinia Virus protein VP39 1 89 IPR029063 -
Seca4g07456 303 Gene3D - 92 293 - -
Seca4g07456 303 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 255 IPR025799 GO:0016274|GO:0018216
Seca4g07456 303 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 238 IPR029063 -
Seca4g07456 303 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 284 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07456 Seca-Chr4 167830384 167832552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07456 1 302 C2H2 Transcription Factor Family AT3G12270 64.686 1.62e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07456 K11436 - gmx:100781879 508.449