Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g07443 | ATGAAAATCCCTTGTTGCTCGGTTTGCCAAACGCGGTACAACGAGGAGGAGCGGGTTCCTCTTCTGCTTCAATGTGGCCACGGCTTCTGCAGAGAGTGCCTTTCTAGAATGTTCTCGGCTTCGCCGGACGCCACGCTCACCTGCCCTCGCTGCCGCCACGTGTCCACCGTCGGCAACTCCGTTCAGGCGCTGCGCAAGAACTACGCCGTGCTTGCGCTCATCCACTCCGCCGCCGACGCATCCTCCGGTGGCGGCGGTGGCAGAGCGTCGAATTTCGACTGCGACTGCACCGACGAGGAAGACGGCGACGGCGAGGAGGACGACGACGACGACGGAGAGAAGCGGCGCCGGAACAGCCGCGGCTCGCAGACGTCGAGCTCCGGCGGTTGCGCGCCGGTGATCGAAGTCGGTGCGCACCAGGACCTGAAGCTGGTGAGGCGGATTGGGGAGGGGAGGAGGGCTGGCGTGGAGATGTGGACGGCGGTGATTGGCGGTGGGCGGTGCCGGCATCACGTAGCGGTGAAGAAGGTGGTGATGGCGGAGGGGATGGATTTGGATTGGATGCAAGGGAAGCTGGAGAATTTACGTAGGGCTTCGATGTGGTGTAGGAATGTGTGCACGTTCCATGGAGCAATGAAGGTGGAAGAGAGTTTGTGTATCGTGATGGATAGGTGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAACGAGGGGAGGCTGACTTTGGAGCAAGTGCTAAGGTATGGAGCAGACATTGCACGAGGGGTTGTCGAGCTTCATGCTGCAGGCGTTGTTTGTATGAATTTAAAACCTTCCAATCTACTTCTTGATGCAAATGGTCATGCTGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCAGAGTGCGACTCCTCAAAGATCCATTCCTGTATGGAATGTATAATGCTCAGCCCACATTATACTGCACCAGAGGCATGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGGAATAGGTATATCTTCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTGCCATTCCTTGGGCCGGTTTAAGTGCAGAGGAAATCTATCGAGCAGTTGTTAAGGCAAAGAAACTGCCTCCACAATATGCCAGTGTGGTTGGTGGTGGAATTCCAAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAGTGCAATGTTAGCAATATTTCTCCGTCATTTACAGGAAATACCACGCAGCCCACCTGCAAGCCCTGATAATGACTTTGTTAAGGGCTCTGTTTCAAATGTGATGGAGCCATCCCCAGTACCTGAGTTAGAAGTTCCTCAGGAAAACCCAAACCATCTTCATCGACTTGTGTCTGAAGGGGATGTCACGGGTGTTAGAGACCTTCTAGCAAAGGCTGCATCAGAAAATGGTAGCAACTACATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGGCAAACGGCTCTCCACTTAGCTTGTAGACGTGGCAGTGCAGAACTTGTTGAAACAATTCTAGGGTATGGAGAGACAAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCCTTAGCAGCTGGGTCCCCTGAATGCGTTCGTAGCCTTATCAAAAGAAATGCTAATGTGAGGTCGCGATTGAGAGATGGCTTTGGCCCATCAGTAGCTCACGTTTGTGCCTATCATGGCCAACCAGATTGTATGCGAGAATTAGTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATCTGTACTGCACAGGGCAGTTGCCAAGAAGTACACAGACTGTGCTCTTGTGATAGTGGAAAATGGAGGCTGTAGATCAATGGCCATCTTGAATTCAAAGAATTTGACGCCACTGCACTTGTGTGTGGCAACTTGGAATGTTGCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTGCTGATGAGATTGCTGAAGCAATTGACATACCAAGCCCTATTGGCACTGCCTTGTGCATGGCAGCTGCTTCTAAAAAAGACCATGAAAGTGAGGGCAGAGAACTGGTGCGAATATTGCTTGCAGCAGGAGCTAATCCATCCGCACAAGATTCACAGAATGGGAGGACAGCTTTGCATACAGCTGCTATGACTAACGATGTGGACCTGGTTAAGGTTATTCTTTCTGCTGGCGTTGATGTGAACATTCGGAATGTGCACAACAGTATACCTCTTCACTTGGCCTTAGCTAGGGGTGCAAAGGCATGTGTTGGACTGCTTCTAGCTGCTGGGGCAGATTACAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCAGCAGAAACGGCAAAAATGATACGTGAAAATCTTGACTGGCTTATTGTTATGCTAAAGAATCCTGATGCTGATATTGAAGTCAGAAACCACAGTGGCAAGACACTGCGTGACATCTTAGAGGCTCTCCCTCGAGAATGGATATCCGAAGATCTGATGGAGGCACTCATGAATAGGGGAGTTCATTTGTCTCCTACAATATTTGAAGTGGGAGACTGGGTGAAATTTAAAAGAACTGTCATAACTCCAACATATGGGTGGCAAGGTGCTAGGCCAAAGAGTGTTGGCTTTGTGCAAAGTGTTCCAGACAGAGATAATCTCATCGTTTCATTTTGTTCGGGAGAAGTTCATGTTCTGGCAAATGAGGTTATAAAAGTCATTCCATTGGACAGGGGACAACATGTACAACTGAAAGAAGATGTGAAAGAGCCCAAGTTTGGTTGGCGTGGGCAGTCGCGGGACAGCATTGGAACAGTATTATGTGTTGATGATGATGGAATCCTCCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGAGTTGAGGAATTCAAGGTTGGGGACTGGGTTCGTATTCGTCCAACTCTTACATCTGCAAAGCATGGATTAGGATCTGTGACACCAGGAAGCATTGGCATTGTATATTGTATCCGACCAGACAGCAGTCTGTTAATAGAACTGAGCTATCTTCCAAATCCATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGCACCTTTTAGGATTGGTGATCGGGTATGTGTGAAGCGATCCGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTCTTAATAATAGATATACCAAATCGACCCATACCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAAGATTTTAAGCAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGGGTAATTCATAGCTTGGAGGAGGATGGTGATATGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTCACTGATGTGGAGAAAGTTCCCCCTTTTGAGGTGGGTCAAGAAATTCATGTGATGCCATCTGTTACTCAGCCACGGCTTGGGTGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCTCTCAATGTGAGGGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTTCCAGGATTTGAAGTTGGGGATTGGGTACGCTCAAAACCAAGCCTCGGAAACAGACCAAGTTATGACTGGACTAGTGTTGGGAGAGAAAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTCCGTAAAGGGAAGTGGATCACTCATTATACGGATGTTGAAAAGGTTCCTAGCTTTAAAGTCGGACAGTATGTTAGATTCAGAACTGGTTTGGTTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAAGGGATTATAACCAGTATTCATGCTGATGGAGAAGTCAGGGTTGCATTCTTTGGTTTGCCAGGACTCTGGAGAGGAGATCCGTCAGACCTGCAGATTGAGCAAATCTTTGAAGTGGGAGAGTGGGTGAGATTGAAAGATAATGCAAATAATTGGAAATCAATTGGGCCAGATAGTGTTGGGGTCGTTCAAGGAATAGGTTATGAAGGAGATGAATTGGACAGAAGCATTTTTGTTGGCTTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCAAGTTCCCATCTTGAAAGAGTTGACAAACTCGTCGTTGGACAAAAGGTTAGAGTTAAACAATATGTAAAACAACCAAGATTTGGTTGGTCAGGGCATACCCATGCTAGTATTGGGACTATACAAGCAATTGATGCTGATGGAAAGCTTCGAATATACACTCCTGCAGGTTCAAAAGCATGGATGTTGGACCCATCTGAAGTGGAGGTGGTGGAAGAGAAGGAGCTCTGTATTGGAGACTGGGTAAGGGTTAGAGCATCAGTTTCAACCCCAACCCATCATTGGGGAGAAGTGAGTCATTCAAGCATTGGGGTGGTGCATCGGATGGAAGATGAGGATCTGTGGGTGGCGTTATGTTTTATGGAGAGGCTGTGGCTCTGTAAGGCATGGGAAATGGAACGGATCAGGCCATTTAAAGTGGGGGACAAGGTAAGGATCAGAGATGGACTGGTCGCCCCACGGTGGGGATGGGGAATGGAGACACATGCCAGCAAAGGACAGGTGGTAGGGGTAGATGCAAATGGCAAACTAAGAATAAGGTTCCGATGGAGGGAAGGGAGGCCCTGGATAGGAGACCCTGCTGATCTTGCCCTTGATGAGAACTGA | 4881 | 0.4802 | MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASPDATLTCPRCRHVSTVGNSVQALRKNYAVLALIHSAADASSGGGGGRASNFDCDCTDEEDGDGEEDDDDDGEKRRRNSRGSQTSSSGGCAPVIEVGAHQDLKLVRRIGEGRRAGVEMWTAVIGGGRCRHHVAVKKVVMAEGMDLDWMQGKLENLRRASMWCRNVCTFHGAMKVEESLCIVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISSESDAWSFGCTLVEMCTGAIPWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFSAMLAIFLRHLQEIPRSPPASPDNDFVKGSVSNVMEPSPVPELEVPQENPNHLHRLVSEGDVTGVRDLLAKAASENGSNYISSLLEAQNADGQTALHLACRRGSAELVETILGYGETNVDVLDKDGDPPLVFALAAGSPECVRSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELVLAGADPNAVDDEGESVLHRAVAKKYTDCALVIVENGGCRSMAILNSKNLTPLHLCVATWNVAVVKRWVEVATADEIAEAIDIPSPIGTALCMAAASKKDHESEGRELVRILLAAGANPSAQDSQNGRTALHTAAMTNDVDLVKVILSAGVDVNIRNVHNSIPLHLALARGAKACVGLLLAAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLKNPDADIEVRNHSGKTLRDILEALPREWISEDLMEALMNRGVHLSPTIFEVGDWVKFKRTVITPTYGWQGARPKSVGFVQSVPDRDNLIVSFCSGEVHVLANEVIKVIPLDRGQHVQLKEDVKEPKFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFKQVGDWVRVKASVSSPKYGWEDITRNSIGVIHSLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSNESPATVGKIVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGNRPSYDWTSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSFKVGQYVRFRTGLVEPRWGWRGAQPESQGIITSIHADGEVRVAFFGLPGLWRGDPSDLQIEQIFEVGEWVRLKDNANNWKSIGPDSVGVVQGIGYEGDELDRSIFVGFCGEQEKWVGPSSHLERVDKLVVGQKVRVKQYVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKAWMLDPSEVEVVEEKELCIGDWVRVRASVSTPTHHWGEVSHSSIGVVHRMEDEDLWVALCFMERLWLCKAWEMERIRPFKVGDKVRIRDGLVAPRWGWGMETHASKGQVVGVDANGKLRIRFRWREGRPWIGDPADLALDEN. | 1627 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g07443 | 1626 | SUPERFAMILY | RING/U-box | 5 | 58 | - | - | |
| Seca4g07443 | 1626 | PRINTS | Ankyrin repeat signature | 513 | 528 | IPR002110 | GO:0005515 | |
| Seca4g07443 | 1626 | PRINTS | Ankyrin repeat signature | 743 | 757 | IPR002110 | GO:0005515 | |
| Seca4g07443 | 1626 | ProSiteProfiles | Ankyrin repeat profile. | 546 | 578 | IPR002110 | GO:0005515 | |
| Seca4g07443 | 1626 | FunFam | E3 ubiquitin-protein ligase KEG | 452 | 682 | - | - | |
| Seca4g07443 | 1626 | SUPERFAMILY | Ankyrin repeat | 503 | 805 | IPR036770 | - | |
| Seca4g07443 | 1626 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE KEG | 1 | 1625 | IPR044584 | GO:0004842|GO:0006952|GO:0009738|GO:0016567 | |
| Seca4g07443 | 1626 | SMART | ANK_2a | 687 | 722 | IPR002110 | GO:0005515 | |
| Seca4g07443 | 1626 | SMART | ANK_2a | 614 | 645 | IPR002110 | GO:0005515 | |
| Seca4g07443 | 1626 | SMART | ANK_2a | 649 | 680 | IPR002110 | GO:0005515 |
Showing 1 to 10 of 49 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g07443 | K16279 | - | gmx:100777576 | 3095.06 |
Showing 1 to 1 of 1 entries