Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07435 ATGGAGGAGAAAGCAGAGAACCAAGATAATAACCACCCATCTCTCCTCCCTAATCATAACACCACCAAGGAAGAGTCACCAAGAAAACCCATTATTGGTGGTAGTAGTGATAGGCTGAAGAGGGATGAGTGGAGTGAAGGAGCTGTGTCTACCCTTCTTGAGGCCTATGAAGCCAAGTGGGTGCTTAGAAACAGAGCAAAACTCAAAGGCCATGATTGGGAAGATGTTGCAAAATATGTTTCATCAAGAGCAAACTCCACCAAATCACCAAAGACACAAACACAGTGCAAGAACAAGATAGAGTCCATGAAGAAAAGGTACAGATCAGAGTCAGCAACTGCAGATGCATCATCTTGGCCTTTATATTCTCGTCTTGATCTTCTTCTCCGTGGGACAGGACCAATATCCACTCTGCCACCACAAACAGCAACAATAGCACCACCACCAACTTCTCAATCACCACACCTTAGCAATAACCAAGCCTTGATTTTGTTAGAGCCATCACTTGCAGTGTCACAAGTTCCCCATCAACCACCTCCTCCATTTGCTCCTCCACCACTTCCAACAGAACAAAACTCACATGGATCCAATGGTGTTGATAGATTAGCCAAGGAGGAAGGATTAGGAACTACAAAGTCTTCTGACCATGTGTCTAACAAGAATAATCCATTGGATACTGATAGCAGCACACCAGCTCTTTATAGTGAAAAGGACAAGGTAAGATGCAACAAGAGGAAGATGAAAATGGAGAACAATAACAACAACAAGAGGAGAAGGAATAAAGAAGAAGTGGATATAGCAGAGAGCATAAGGTGGCTAGCAGAAGTGGTGGTAAGGTCAGAACAAACAAGAATGGACACATTGAAAGAGATAGAGAAGATGAGAGTTGAAGCTGAGGCAAAGAGAGGGGAAATGGATCTCAAGAGAACTGAAATCATTGCCAATACTCAATTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTGAGAATTGGAAGAAGTTAA 1023 0.4252 MEEKAENQDNNHPSLLPNHNTTKEESPRKPIIGGSSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAKYVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATADASSWPLYSRLDLLLRGTGPISTLPPQTATIAPPPTSQSPHLSNNQALILLEPSLAVSQVPHQPPPPFAPPPLPTEQNSHGSNGVDRLAKEEGLGTTKSSDHVSNKNNPLDTDSSTPALYSEKDKVRCNKRKMKMENNNNNKRRRNKEEVDIAESIRWLAEVVVRSEQTRMDTLKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07435 340 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 24 326 IPR044823 -
Seca4g07435 340 MobiDBLite consensus disorder prediction 232 262 - -
Seca4g07435 340 MobiDBLite consensus disorder prediction 133 156 - -
Seca4g07435 340 MobiDBLite consensus disorder prediction 212 231 - -
Seca4g07435 340 Pfam Myb/SANT-like DNA-binding domain 41 127 IPR044822 -
Seca4g07435 340 FunFam Trihelix transcription factor ASIL2 44 109 - -
Seca4g07435 340 MobiDBLite consensus disorder prediction 1 43 - -
Seca4g07435 340 MobiDBLite consensus disorder prediction 172 262 - -
Seca4g07435 340 MobiDBLite consensus disorder prediction 22 43 - -
Seca4g07435 340 Gene3D - 44 109 - -
Seca4g07435 340 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07435 Seca-Chr4 166896094 166898302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07435 29 148 Trihelix Transcription Factor Family AT3G14180 33.871 4.58e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca4g07435 Myb_DNA-bind_4 4.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07435 - - gmx:100799917 443.736