Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07416 ATGGCTCCGGAGGTATTGAAGAGGAATTATAGGCCAGAAGTTGATGTATGGAGCGCTGCGGTTATTCTTTATATTCTGTTACGTGGTGTTCCTCCGTTTTATGCAGAGAGTGAGCAAGGGGTGGCTTTGGCAATTTTAAGGAGCGTGATTGACTTTAAGAGAGAACCTTGGCCTCAGATATTAGAAAGTGCTAAGAGCCTTGTGCGAGGGATGTTGGAGTAG 222 0.455 MAPEVLKRNYRPEVDVWSAAVILYILLRGVPPFYAESEQGVALAILRSVIDFKREPWPQILESAKSLVRGMLE. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07416 73 Pfam Protein kinase domain 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g07416 73 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Seca4g07416 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g07416 73 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 73 - -
Seca4g07416 73 SUPERFAMILY Protein kinase-like (PK-like) 1 72 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07416 Seca-Chr4 166376440 166376661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07416 1 73 EF-hand Containing Proteins AT3G51850 82.192 3.82e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca4g07416 Pkinase 1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07416 K13412 - sspl:121782848 129.798