Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07342 ATGAGAGTTAAAATTCTGAATATCAAAAGATTGGCACCAAATCAGAACACAAAGCACAGTATCTCTGACCTTAAAGTTGGCAATCCATACAAGCATCACCCACCTAGATGTTCATTCTCTTTCCTTTTTGTCTCTTCCTCTCTACTTGCCTGTAACTTTCTCTCTGTCCCTCAAGTTATACATCCCCTTCCTTGTCTGCAGCAACTCAACCCAGAATCTAAACAGAACAAGCTACCAATGTCTCCAGCAGGAGTGGAATTAGAAACTCCTAGTGCTTCTCAAATTCAGCAAATAACAACCCACCTTTCTTTCTATGGAAGGATACAAGGCAAAAATGTGTTCTATTGGTTTTACAACCATAAGGCTAGGGACAGGCAAAAGCTCAGGAGGAAACTTACCAAGCAACTGCAGCTACAACAACAACTCCAAGTTCATCATTGCCAACTCAATCAGGATATGAATAACCATTTTCATGGTACCTTTGGTTATCCTACTGGATCAAGTACAAAAGAAATGTCCTTTTTTAACTCAGCTACCTTGCTTTTTCAGAAGTACATATTTAAGCACAAAAATGAAGACAACAAGCCGAGAAGAAGCAGCCAGAAAACTCAACAGAACAACGAATATGAGAAGAACAAGACAGTTTAG 648 0.3935 MRVKILNIKRLAPNQNTKHSISDLKVGNPYKHHPPRCSFSFLFVSSSLLACNFLSVPQVIHPLPCLQQLNPESKQNKLPMSPAGVELETPSASQIQQITTHLSFYGRIQGKNVFYWFYNHKARDRQKLRRKLTKQLQLQQQLQVHHCQLNQDMNNHFHGTFGYPTGSSTKEMSFFNSATLLFQKYIFKHKNEDNKPRRSSQKTQQNNEYEKNKTV. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07342 215 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 88 204 IPR044555 GO:0003700|GO:0099402
Seca4g07342 215 MobiDBLite consensus disorder prediction 191 215 - -
Seca4g07342 215 Pfam Homeodomain 88 126 IPR001356 GO:0003677
Seca4g07342 215 MobiDBLite consensus disorder prediction 200 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07342 Seca-Chr4 164392954 164395093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07342 87 134 Wox Gene Family AT2G28610 79.167 6.07e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Seca4g07342 Homeodomain 3.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07342 - - gmx:102663963 112.464