Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07339 ATGGCTACCCTTGTTGTTCCTAACCAAACTTCTCCTGTTGAAGATGCTGAGGCTCTGCGAAAGGCTTTCAAAGGATGGGGTGCTGATGACAAGGCCATTATAGCAATACTGGGTCACAGGAATGTTTATCAGAGGCAGCAAATCAGAAAAGCTTATGAGGAGCTCTTCCAAGAGGACCTCATCAAGCGCCTTGAGTCAGAGATCTCTGGTGACTTTGAGAGAGCTGTGTACCGCTGGATGTTGGAACCTGCAGACCGTGATGCGGTTTTGGTGAATGTAGCAATCAGGAATGGCAACAAAGACTACCATGTGGTTGCTGAAATTGCTTGTGTCCTATCTGCTGAAGAGCTCTTGGCTGTGAGGCGTGCCTATCACAACCGCTACAAGCATTCCTTGGAAGAAGATGTGGCAGCTAATACCACTGGCCATCTTCGCCAGCTTTTAGTTGGATTGGTGACCTCATACAGATATGAGGGTGATGAGATAAATACAAGATTGGCACAAACTGAAGCTAATATTCTTCATGAAAGTGTCAAGGAGAAGAAAGGCAACTATGAAGAAGTCATCAGGATCCTTACTACAAGGAGCAAGACTCAACTTGTGGCAACTTTCAACCGTTACAGAGATGAACATGGCATCTCCATCAGTAAGGTACTATCTTTGCAGAAATTGTTGGACCAAACATCTGATGACTTCCACAAGGCATTGCACACAGCTATTCGGTGCATCAATGACCATAAGAAGTACTATGAAAAGGTTCTGCGCAATGCAATGAAAAGATTTGGAACTGATGAGGATGGACTCAGCCGTGTGGTGGTCACAAGGGCTGAGAAGGATCTGAGGGACATCAAAGAACTTTACTACAAGAGAAACAGTGTTCATCTTGAAGATGCAGTCTCCAAGGAAATCTCAGGGGACTACAAGAAGTTCATCCTCACTCTGTTGGGGAAACAAGACTAA 960 0.45 MATLVVPNQTSPVEDAEALRKAFKGWGADDKAIIAILGHRNVYQRQQIRKAYEELFQEDLIKRLESEISGDFERAVYRWMLEPADRDAVLVNVAIRNGNKDYHVVAEIACVLSAEELLAVRRAYHNRYKHSLEEDVAANTTGHLRQLLVGLVTSYRYEGDEINTRLAQTEANILHESVKEKKGNYEEVIRILTTRSKTQLVATFNRYRDEHGISISKVLSLQKLLDQTSDDFHKALHTAIRCINDHKKYYEKVLRNAMKRFGTDEDGLSRVVVTRAEKDLRDIKELYYKRNSVHLEDAVSKEISGDYKKFILTLLGKQD. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07339 319 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 Gene3D Annexin 165 244 IPR037104 GO:0005509|GO:0005544
Seca4g07339 319 FunFam Annexin 82 152 - -
Seca4g07339 319 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Seca4g07339 319 ProSiteProfiles Annexin repeat profile. 245 316 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 Pfam Annexin 171 237 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 Pfam Annexin 252 314 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 Pfam Annexin 87 151 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 PANTHER ANNEXIN 12 314 - -
Seca4g07339 319 PRINTS Plant annexin signature 160 180 IPR009118 -
Seca4g07339 319 PRINTS Plant annexin signature 230 248 IPR009118 -
Seca4g07339 319 PRINTS Plant annexin signature 118 132 IPR009118 -
Seca4g07339 319 FunFam Annexin 165 244 - -
Seca4g07339 319 FunFam Annexin 246 317 - -
Seca4g07339 319 PRINTS Annexin family signature 258 278 IPR001464 GO:0005509|GO:0005544
Seca4g07339 319 PRINTS Annexin family signature 302 315 IPR001464 GO:0005509|GO:0005544
Seca4g07339 319 PRINTS Annexin family signature 173 199 IPR001464 GO:0005509|GO:0005544
Seca4g07339 319 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Seca4g07339 319 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Seca4g07339 319 Gene3D Annexin 82 152 IPR037104 GO:0005509|GO:0005544
Seca4g07339 319 ProSiteProfiles Annexin repeat profile. 165 241 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 Gene3D Annexin 247 317 IPR037104 GO:0005509|GO:0005544
Seca4g07339 319 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 SMART annex3 182 239 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 SMART annex3 262 314 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Seca4g07339 319 FunFam Annexin 1 81 - -
Seca4g07339 319 ProSitePatterns Annexin repeat signature. 262 314 IPR018252 GO:0005509|GO:0005544
Seca4g07339 319 SUPERFAMILY Annexin 3 317 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07339 Seca-Chr4 164382586 164386628 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07339 K17098 - gmx:100806472 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07339 4 164382586 164386628 Seca4g07339 4 164382586 164386628 ECH
Seca4g09867 4 231277318 231281289 Seca4g07339 4 164382586 164386628 PCT