Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07335 ATGGAGAAATCTAAATTTGTGTCTAGCATTAAGTGTGTTGATGATAAGGATCCATCATTTAATTTGTGTTCTAATGATTCTGTTATGGGTAAGGAAGGTGAATTTTTTTATTATGATGAAAAAGAAGATATTGTTGTATCTCATGATGAGCCTAGTAGGTTGCTTGACTTGTCTGGGGATGAAATTATGTCCCTTGAATTTGGCAGTGAAGAAGAGGCATATAATTTTTATCAATTATATGCTAAGTTTGATGGCTTTGTGGTTAGAAAAGATGACGTAATGAAGGATATTAGGGGTAATTTAATTATGCGGCAGTTTGTTTGCAATAGGGAGGGACTAAGAAATAAGAAGCACTTTATGAGGGTAGATAGGAAGAGAGAGCATAGGCCACTTACCCGTACAAATTGTCAAGCCAAACTTCGTATACACTACCATCAGAAGAGTTTAAAGTGGAAAGTGGTGTCATTTGAGCAATGTCATAACCATGAGCTTACCCCTTCTAGATTTGTGCACCTACACCCTGCTTACCGGGGGTTAACGGATGCTGATAAGACTCAGGTTGATAGTTTGCATACATATGGTCTTAGAGGTTGTCATATTACGAGGTACCTATGA 615 0.374 MEKSKFVSSIKCVDDKDPSFNLCSNDSVMGKEGEFFYYDEKEDIVVSHDEPSRLLDLSGDEIMSLEFGSEEEAYNFYQLYAKFDGFVVRKDDVMKDIRGNLIMRQFVCNREGLRNKKHFMRVDRKREHRPLTRTNCQAKLRIHYHQKSLKWKVVSFEQCHNHELTPSRFVHLHPAYRGLTDADKTQVDSLHTYGLRGCHITRYL. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07335 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 44 196 - -
Seca4g07335 204 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07335 Seca-Chr4 164268954 164269568 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g07335 FAR1 3e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07335 - - ccaj:109792835 230.335