LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g07327	ATGTATGCTTTGGAGGATAATAATGACGACAAACAAGATATAGAGATTGAGTCTGGCATGCGCTTTGAATCCTCTGAAGAGGTTAAGAGACTTTACCAGGAGTATGCAATTAGAAAAGGATTTTCTATCCTAACAAGGAATTCGAGGAAAGGTGTTGATGGCAAGCTCACATACTTCAACTTCAGCTTGACTTGTTCAAGGGAGGAGTCATATGTGTCCTTTGTTCCCACTAATGCGAAGTCTATACCATCTACTAAAATGAAGTGTATCGCCCACATCACTACCAATCTTCATAAAGATGGACTTTGGCACATCAACAAATGTGTGCATGACCATTCTCATGAGCTAAGCCCTGGAAAGTCCAGGTTATTCGCAAAGAACCACAAGATGAGCTTGCATGTCAAACGACTTGTACAACTTAATGATGAAGCTGGTGTGTGGATAAACAAGAGCTTCCGCTCTCTTGTTTATGAAGCGGGAGGATATGACAATGTTCATTTTGTTGAAAGAGACATACGCAATTTCATGGGGCAACAAAGACGGACCTTAGGCAAAGACGGTGATGGGAAGGCACTGCTAAGCTACTTTGCAAGAATGCAACTACAGAATTCCACTCTCTCTTATGAGATTGACTTAGATGAAGATAGCCGATTGAGGCATGTGTTATGGGAAGATGCAATGGAAACATACTCGTCATGGCCATATCCTTTCTACTGA	717	0.4156	MYALEDNNDDKQDIEIESGMRFESSEEVKRLYQEYAIRKGFSILTRNSRKGVDGKLTYFNFSLTCSREESYVSFVPTNAKSIPSTKMKCIAHITTNLHKDGLWHINKCVHDHSHELSPGKSRLFAKNHKMSLHVKRLVQLNDEAGVWINKSFRSLVYEAGGYDNVHFVERDIRNFMGQQRRTLGKDGDGKALLSYFARMQLQNSTLSYEIDLDEDSRLRHVLWEDAMETYSSWPYPFY.	239

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g07327	238	Pfam	FAR1 DNA-binding domain	31	117	IPR004330	-
	Seca4g07327	238	PANTHER	OS01G0519700 PROTEIN	8	227	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g07327	Seca-Chr4	164074361	164075077	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca4g07327		FAR1	5e-10	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g07327	-		-	vun:114180824	228.024