Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07327 ATGTATGCTTTGGAGGATAATAATGACGACAAACAAGATATAGAGATTGAGTCTGGCATGCGCTTTGAATCCTCTGAAGAGGTTAAGAGACTTTACCAGGAGTATGCAATTAGAAAAGGATTTTCTATCCTAACAAGGAATTCGAGGAAAGGTGTTGATGGCAAGCTCACATACTTCAACTTCAGCTTGACTTGTTCAAGGGAGGAGTCATATGTGTCCTTTGTTCCCACTAATGCGAAGTCTATACCATCTACTAAAATGAAGTGTATCGCCCACATCACTACCAATCTTCATAAAGATGGACTTTGGCACATCAACAAATGTGTGCATGACCATTCTCATGAGCTAAGCCCTGGAAAGTCCAGGTTATTCGCAAAGAACCACAAGATGAGCTTGCATGTCAAACGACTTGTACAACTTAATGATGAAGCTGGTGTGTGGATAAACAAGAGCTTCCGCTCTCTTGTTTATGAAGCGGGAGGATATGACAATGTTCATTTTGTTGAAAGAGACATACGCAATTTCATGGGGCAACAAAGACGGACCTTAGGCAAAGACGGTGATGGGAAGGCACTGCTAAGCTACTTTGCAAGAATGCAACTACAGAATTCCACTCTCTCTTATGAGATTGACTTAGATGAAGATAGCCGATTGAGGCATGTGTTATGGGAAGATGCAATGGAAACATACTCGTCATGGCCATATCCTTTCTACTGA 717 0.4156 MYALEDNNDDKQDIEIESGMRFESSEEVKRLYQEYAIRKGFSILTRNSRKGVDGKLTYFNFSLTCSREESYVSFVPTNAKSIPSTKMKCIAHITTNLHKDGLWHINKCVHDHSHELSPGKSRLFAKNHKMSLHVKRLVQLNDEAGVWINKSFRSLVYEAGGYDNVHFVERDIRNFMGQQRRTLGKDGDGKALLSYFARMQLQNSTLSYEIDLDEDSRLRHVLWEDAMETYSSWPYPFY. 239
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07327 238 Pfam FAR1 DNA-binding domain 31 117 IPR004330 -
Seca4g07327 238 PANTHER OS01G0519700 PROTEIN 8 227 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca4g07327 Seca-Chr4 164074361 164075077 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g07327 FAR1 5e-10 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07327 - - vun:114180824 228.024