Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07320 ATGGAAGCAAAATCGGAAAGAAGAGGTGGTTGTGAGATATCTCATACTCCTGCAGCTGGACAAACCTTTCTTGTTAGCTACTTAAAGCTTTTCCCAAATAAAAAAGCCTCTGATCCTTGCACCAAAAACTACACTGTATACTTGGTACAAGTTCCAAACCCCACTGGTGATATCAAGCATGTTTTAGATTGCCTTGAAAAGATTAAAAAATGGCATCTACACCGTAGTGTTATGGTCATGGGGTATGCTTCATTTTTATCACTAACAAGAGATAATTCAAAGTATGAACACAAGAAGTATATGGCTAAAGCATTGAGAGAAAGCACTGGGATCCTGATACTCGATGAAGGGCACAATCCTAGAAGCACCAAGTCAAGGCTAAGGAAAGGTTTGATGAAAGTAGAGACAGAACTGAGAATATTTCTTTCAGGCACATTGTTTCAGAATAATTTTAGTGAATACCTCAACACACTTTGCTTGGCAAGGCCGAAGTTTGTTCAAGAAGTGCTGAAAGAATTAGATACAAAACAAAAGAAGGGAAATGATAAAAATTCAGAGAAACCAAAACATTTTGCAAAATGA 582 0.3729 MEAKSERRGGCEISHTPAAGQTFLVSYLKLFPNKKASDPCTKNYTVYLVQVPNPTGDIKHVLDCLEKIKKWHLHRSVMVMGYASFLSLTRDNSKYEHKKYMAKALRESTGILILDEGHNPRSTKSRLRKGLMKVETELRIFLSGTLFQNNFSEYLNTLCLARPKFVQEVLKELDTKQKKGNDKNSEKPKHFAK. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07320 193 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 4 35 IPR044567 GO:0080188
Seca4g07320 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 166 IPR027417 -
Seca4g07320 193 Pfam SNF2-related domain 75 168 IPR000330 GO:0005524|GO:0140658
Seca4g07320 193 Gene3D - 40 192 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07320 Seca-Chr4 163953361 163954039 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Seca4g07320 SNF2_N 2.8e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07320 K10875 - gmx:100785036 247.669