Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07283 ATGGTTCAAAGAAAGGTGCCTAGCAAGCTTGGTATCCAAGCTGAACATATTAAATCAGATAAGCACTTGGCAAACCTGAAACTATCTTCTTCTCAGCACCAAGATGGCAAAAATAGAGGAGCTGATATGAAGAAAAAGATGAGGAAATCAAGGTCAATCAAGCTTTCTGATCTTGAGACTCTTCAATCATCATCATCACCTTCAAGGAGAAGCTTATCCCAACCAGGAAAACCACCACCACCTCTTCATGTTCCAACAACTTCAGCATCAGCTTCCCCACAGAAACAGCATCATCCTTTGGTGAGAACCACAGATGGTTCACCCAATTACATGAAGCCCACAAGCAGTTCACATGCAAAAAAGGAGCTTTTCCCGGTGAGTCATAGGAACACTCAATCTGGTTCTGATTTTAAGAATCTTTCAAGAAAATTTTCTAGTGATTCAAAAGCTACCTGTGTTTCTAGTAAAAAACCAGCAAAAGCTAGTTTGAGTTTGGTGAGAACGTTAACAAAGACTACTAGTTTCAAGGCTTCTAGAGCATGTCCTAAAAAATCCACCAGAGCTGCTATGTGTGCTGCAGATATAAAAAATGCACCACATAGAGCTACTTGTTCTTCAACTTTGAAAGACTCAAAGTTCCCTGCATACCTCATGCTTAATCCTGGTGGAACTGAATCAGAGGGAACTTCAATGATGAAGGTTTGCCCATATACATATTGTTCTCTTAATGGCCATCATCATGCTGATTTGCCTCCATTGAAGAGCTTCATGTCTTCAAGGAGGCGCCTTTTGAAGACCCAGAAGCGTATGAAGCTGGAAGCTTTGAGCCCTCGAAGATTGAAGGTTCCCCATGAGACAAAGAAGAAGGACTCTGATATTGAGCAGAGTGTCTTTGATGCAAAACCTAGTGCATATGATGAAATTGACATGGATATCTTCATTGAAATCTATGCTAATGAAAAGGATGCAAAACCAACAGCAGAAGAAGCAATGGAAAAAATAGATTTTCTCAAGGAGATTGAGGATCAAGAAGATGTCATTGTCAAGCCTACAATTGAGGATAAGGGTGTCACTATCATGCAAGTTATTCCAAGCATTGCTGATACTCCTCCTCATGAATCTCAGATTGAACTTGAGGAAGATTTGAAAACTGTCTTTGACGATGTTGTTGCAGTTGAAGCAGATACCAAAGGAAGCTTTCTCCAAGAGCAAAATGCAGAAGAAGACCCCCAACCTAGCTGGTCTCATGAAGAAATGAGTATGGGAAGCTACTGCAGTGATGAGGAACACATGGATGATTCTGATTCCAAAGCAGATAGTATGGAGTGGGAGGAGGAACAATTTTATGGATTTGACCATAAAGAGGATGCTGATTCAAAAATTGAGACCTTATCAGAGAGTTCTCATGATGTGTCAGTGACATGGTTAGATGATATCCTTAGCACCTATTATGAGGGCATTCTGGTTGATGAAATGCTCAAAGAAGCCAAATTAAAAGAAACCCTTTTATTTGAAGAACAACCTCATGATGGCATTAGTTCTGTCCTTGAAGACATAAGTGGAAGCAATGAGACCCAAGAAACTGGTTACCCCTCCAGTGACATGGGTTGTGACCAATCTTCTTTGACAGAGGAAGTATTTGAGTACCTGACAAATGCAGAGGATAATGGTGGAGAAAATGAAGAATTGGCCAATTGCAACATGGAGGAACTTGATGACAATAGCCAATACCAAGAGGTGAGTGAAACTTGCAAGATTGATGAGACAAACGAAGATAGATCCTCAAGCCAAGAGAACAATGATGACAACAGCAATAGTGAGGAGAACCAAATTTACTTGTTGGATGAAGAAAGCAACATCACAGGTGTTGAAGATCAAGGCAAAGGTAATAAGTTCCAGAGGAGAAGTTGCATTGGTGAAGAGCAAAACACAGGGGAGAATTGGAAAATTGCAATTGGAAGAAAGAGGCAGGTTGAAGAAGATGATGATGAAATGAGAAAGTTCAACCCAAAAGATCCAAATTACTTGCCTTTGGTTCGTGATCCAGAAGCTGAAAAGGTTGATCTGAGGCATCAAATGATGGATGAGAGGAAGAATGCAGAGGAATGGATGCTTGATTGTGCACTCAGACAAGTTGTCACAAAACTTGCTCCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGATAATGCCAATACCAAAATGTGATACCCATTTGAGAAACAATTCAGCCTTTGCTCATTCAAGACATATTCAAGCTTGTAGCTGA 2283 0.406 MVQRKVPSKLGIQAEHIKSDKHLANLKLSSSQHQDGKNRGADMKKKMRKSRSIKLSDLETLQSSSSPSRRSLSQPGKPPPPLHVPTTSASASPQKQHHPLVRTTDGSPNYMKPTSSSHAKKELFPVSHRNTQSGSDFKNLSRKFSSDSKATCVSSKKPAKASLSLVRTLTKTTSFKASRACPKKSTRAAMCAADIKNAPHRATCSSTLKDSKFPAYLMLNPGGTESEGTSMMKVCPYTYCSLNGHHHADLPPLKSFMSSRRRLLKTQKRMKLEALSPRRLKVPHETKKKDSDIEQSVFDAKPSAYDEIDMDIFIEIYANEKDAKPTAEEAMEKIDFLKEIEDQEDVIVKPTIEDKGVTIMQVIPSIADTPPHESQIELEEDLKTVFDDVVAVEADTKGSFLQEQNAEEDPQPSWSHEEMSMGSYCSDEEHMDDSDSKADSMEWEEEQFYGFDHKEDADSKIETLSESSHDVSVTWLDDILSTYYEGILVDEMLKEAKLKETLLFEEQPHDGISSVLEDISGSNETQETGYPSSDMGCDQSSLTEEVFEYLTNAEDNGGENEELANCNMEELDDNSQYQEVSETCKIDETNEDRSSSQENNDDNSNSEENQIYLLDEESNITGVEDQGKGNKFQRRSCIGEEQNTGENWKIAIGRKRQVEEDDDEMRKFNPKDPNYLPLVRDPEAEKVDLRHQMMDERKNAEEWMLDCALRQVVTKLAPARKKKVALLVEAFETIMPIPKCDTHLRNNSAFAHSRHIQACS. 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07283 760 MobiDBLite consensus disorder prediction 126 140 - -
Seca4g07283 760 SMART CaM_binding_2 624 736 IPR012417 GO:0005516
Seca4g07283 760 MobiDBLite consensus disorder prediction 514 539 - -
Seca4g07283 760 Pfam Plant calmodulin-binding domain 632 736 IPR012417 GO:0005516
Seca4g07283 760 MobiDBLite consensus disorder prediction 586 606 - -
Seca4g07283 760 MobiDBLite consensus disorder prediction 87 116 - -
Seca4g07283 760 MobiDBLite consensus disorder prediction 400 442 - -
Seca4g07283 760 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 736 IPR044681 GO:0005516
Seca4g07283 760 MobiDBLite consensus disorder prediction 56 72 - -
Seca4g07283 760 MobiDBLite consensus disorder prediction 1 140 - -
Seca4g07283 760 MobiDBLite consensus disorder prediction 516 539 - -
Seca4g07283 760 MobiDBLite consensus disorder prediction 422 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07283 Seca-Chr4 163119660 163124080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07283 634 760 Calmodulin-binding Proteins AT2G38800 52.344 1.04e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07283 - - gmx:102660315 942.954