Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07264 ATGAATCATCTATGGGGTGCAAATTGGTGCATTATTGGGGGACCTTTAAGAGGACCTTTCTCTGTGAAATTAAGCTCATCCACGGGGAGAAGCCTCACTGCTAAAAATGTTATTCCAAGCAATTGGTCTCCAAAAGGCACTTATACCTCTCGCTTAAATTTCTCTCCATAA 171 0.4152 MNHLWGANWCIIGGPLRGPFSVKLSSSTGRSLTAKNVIPSNWSPKGTYTSRLNFSP. 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07264 56 SUPERFAMILY PHL pollen allergen 1 50 IPR036749 -
Seca4g07264 56 Pfam Expansin C-terminal domain 1 39 IPR007117 -
Seca4g07264 56 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 1 50 IPR007117 -
Seca4g07264 56 Gene3D - 1 55 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07264 Seca-Chr4 162519916 162520086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07264 1 54 Expansin Gene Family AT1G65680 42.857 2.34e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07264 K20628 - gmx:100810778 110.923