Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07257 ATGGTGCCCTTTGTTTTGCCTCTTCTATTCTTCTCATTCTTAGTGGGGAATTCTAAAGAAAAGCTCCAAGTGGGTTTCTATTCCAACACATGTCCTCAAGCAGAGCCTACTGTTCATGCTGTTGTTAGAGATGTTGTTCTCTCTGACCCCAACATGGCTGCTATCTTGCTCAGGCTTCAGTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCTATTCTGATCGACGATGGTCCACAATCAGAGAAACTAGCATTTGCACATCAATGGGTTAGGGGGTTTGGAGTGATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTGCCCAGGAGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCCAGAGATGCCATAGTCATTGTCTTAACTCTTAACTTACTTGATTAG 411 0.4428 MVPFVLPLLFFSFLVGNSKEKLQVGFYSNTCPQAEPTVHAVVRDVVLSDPNMAAILLRLQFHDCFVEGCDGSILIDDGPQSEKLAFAHQWVRGFGVIERAKAQLEASCPGVVSCADIVALAARDAIVIVLTLNLLD. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07257 136 ProSiteProfiles Plant heme peroxidase family profile. 21 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Seca4g07257 136 PANTHER PEROXIDASE 25-RELATED 11 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 Pfam Peroxidase 39 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 SUPERFAMILY Heme-dependent peroxidases 22 128 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g07257 136 Gene3D - 21 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07257 Seca-Chr4 162444946 162445875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07257 6 126 Peroxidase AT4G25980 66.116 5.05e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07257 K00430 - gmx:547549 199.519