Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07221 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAGATAATGTTCTATTGTCAAATCCAGAGTCATCTAGCAATTTTCAAGCTTCAACATCAGTGAATACAGTTACTGAATTGTCTAGGAGCACCAGAACATGCACTCACACTCACACTTGCAACCCACCTGGCCCTGATGCTGCTCACACACACACATGCTTTCACACTCATACCCAAGTTTTTGCTTCTGAAGATGATACCAACTCAAAACCAAAAAGGCCTTCTGGCAACAGAGAAGCAGTTCGAAAGTATAGGGAGAAGAAGAAGGCACACACGGCTTACTTGGAGGAGGAGGTTAAGAAATTGCATCTAGTGAATCAGCAACTAGTCAGGAAGCTACAGGGGCAGGCACTTCTTGAAGCAGAGTTGTCAAGGTTGAGGAACATTTTGGGACACCTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCTTTTCAAAAACAGTGTAATTCTTCTTCTCTTTTAAAAGAAAGGGATACCGGTTTGCTTTCCACTCCTCAGACAATTGGTCTTCAGTGTCAGAACAATTTGCCATGTTTCCACCCACATACAGGATCATCATCCAAGGTTGATGATAAAATAACGCTGGAAAACCGTCGGGCCCTGGGAACTTTAGAGAGTGCATTTGTGTGA 672 0.4315 MDDGNAELSDKLSDNVLLSNPESSSNFQASTSVNTVTELSRSTRTCTHTHTCNPPGPDAAHTHTCFHTHTQVFASEDDTNSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLHLVNQQLVRKLQGQALLEAELSRLRNILGHLKGKIDSELGAFPFQKQCNSSSLLKERDTGLLSTPQTIGLQCQNNLPCFHPHTGSSSKVDDKITLENRRALGTLESAFV. 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07221 223 CDD bZIP 89 136 - -
Seca4g07221 223 SUPERFAMILY Leucine zipper domain 84 126 IPR046347 GO:0003700|GO:0006355
Seca4g07221 223 MobiDBLite consensus disorder prediction 1 36 - -
Seca4g07221 223 MobiDBLite consensus disorder prediction 78 95 - -
Seca4g07221 223 MobiDBLite consensus disorder prediction 12 36 - -
Seca4g07221 223 PANTHER CCAAT/ENHANCER BINDING PROTEIN 16 157 IPR031106 GO:0003700|GO:0006351
Seca4g07221 223 Pfam Basic region leucine zipper 79 134 IPR004827 GO:0003700|GO:0006355
Seca4g07221 223 MobiDBLite consensus disorder prediction 74 96 - -
Seca4g07221 223 SMART brlzneu 75 144 IPR004827 GO:0003700|GO:0006355
Seca4g07221 223 Gene3D - 69 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07221 Seca-Chr4 160938070 160940042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07221 41 178 bZIP Transcription Factor Family AT3G51960 55.862 2.30e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca4g07221 bZIP_2 6.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07221 K25785 - gmx:100527780 294.664