Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07213 ATGGGCAAAGCAAGTTGTTGGGTTTTTCTATCCTTTCTCATTGTTACCCTCTTTGTGGATGAAATCCATGGAAGCAAACAAGTTAGAGCCCTTGACAAGTTTCATAAGTCCAAGTTCAAGGGAAGTTCACAAATTGATAGGAGCCAATTTGTGGCACAAGAGCTTATTGTGCATGATGCTGCCATGGTTCATTCTCAGGATGGTTTGAAAGAGAAAGATAGGATTGAGAAGCTTCCAGGGCAGCCCCAGGTGAAATTCTCTCAGTATGGAGGGTATGTCACAGTGGATAAATTGGCAGGGCGTGCCTTTTACTATTACTTTGTGGAAGCTCAACGTTCTAAAGAAACACTGCCTCTTCTTCTTTGGCTCAACGGAGGTCCTGGATGTTCATCTCTTGCGTATGGAGCAATGCAAGAAATTGGACCCTTCCGTGTAAACAGTGATGGGAAAACGCTTTACAAAAATAGATATTCATGGAACTACGCTGCAAATGTTTTGTTCCTGGAGTCACCGGCTGGGGTAGGATTTTCTTACTCAAACAAATCATCTGATTATGACACAAATGGGGATAGAAAAACAGCTGCAGATAACTATGTGTTCTTAGTGAATTGGTTGGAAAGGTTCCCTGAATATAAGAATAGAGATTTCTATATTGCTGGGGAGAGCTATGCTGGGCATTATGTCCCTCAACTTGCACACAATATTCTCTTCCATAACAAAAAGGCAAACAAGACACTCGTCAACCTCAAAGGAATAATGATTGGGAATGCAGTGATCAATGATGAAACAGATACAAAAGGAATGTATGATTTTCTTGCCAGCCATGCAATCATATCAGACCAAGCAGCACATGATATCAACAAATTTTGTGATCTCTCATCAAGTGCTTCCAACCAGACTAGTGAGTGCAATGCAGCAGTTGATGAAATTGGGAAGGATATTGCCTTCATTGATGTCTACAACATCTATGCTCCACTCTGCAATAATCCCAACCTCACTACCCAGCCCAAGAAGAACTCTGTGAGATCCAAAATCCAACCCCTTTTCTTTTTGTTGCTATCCTTAAATCGCTCAAAGCAGGTTGTTATTGATCCCTGTAGTGATAACTATGTATATGCATATCTTAACCGAGGTGATGTTCAAGAGGCCATCCATGCCAATGTCACCAAGCTCAAATATGACTGGGAGCCTTGTAGTGATATCATTTCAAAGTGGGAAGATAGTCCTTCAACAGTCATTCCCCTTTTACATGAATTCCTCAATAGTGGACTCAGGGTCTGGATTTTTAGTGGTGATATAGATGGAAGGGTGCCTGTTACTTCAACCAAGTATTCCATTAACAAGATGAAGCTTCCCATTCAAACTACCTGGCATCCATGGTTCATATATGGAGAGGTTGGAGGCTATACTCAAGTATACAAGGGAGGTCTAACTTTTGCCACAGTGAGAGAAGCAGGACATCAAGTGCCAAGCTACCAGCCAGCAAGAGCCCTTTCTCTAATCAAACATTTCTTAGATGGCACTCCTCTTCCCAATACTAAAAGATATGACTAA 1554 0.4157 MGKASCWVFLSFLIVTLFVDEIHGSKQVRALDKFHKSKFKGSSQIDRSQFVAQELIVHDAAMVHSQDGLKEKDRIEKLPGQPQVKFSQYGGYVTVDKLAGRAFYYYFVEAQRSKETLPLLLWLNGGPGCSSLAYGAMQEIGPFRVNSDGKTLYKNRYSWNYAANVLFLESPAGVGFSYSNKSSDYDTNGDRKTAADNYVFLVNWLERFPEYKNRDFYIAGESYAGHYVPQLAHNILFHNKKANKTLVNLKGIMIGNAVINDETDTKGMYDFLASHAIISDQAAHDINKFCDLSSSASNQTSECNAAVDEIGKDIAFIDVYNIYAPLCNNPNLTTQPKKNSVRSKIQPLFFLLLSLNRSKQVVIDPCSDNYVYAYLNRGDVQEAIHANVTKLKYDWEPCSDIISKWEDSPSTVIPLLHEFLNSGLRVWIFSGDIDGRVPVTSTKYSINKMKLPIQTTWHPWFIYGEVGGYTQVYKGGLTFATVREAGHQVPSYQPARALSLIKHFLDGTPLPNTKRYD. 518
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07213 517 Gene3D - 412 507 - -
Seca4g07213 517 FunFam Carboxypeptidase 69 329 - -
Seca4g07213 517 Gene3D - 366 402 - -
Seca4g07213 517 SUPERFAMILY alpha/beta-Hydrolases 76 511 IPR029058 -
Seca4g07213 517 Gene3D alpha/beta hydrolase 69 329 IPR029058 -
Seca4g07213 517 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 494 IPR001563 GO:0004185|GO:0006508
Seca4g07213 517 FunFam Carboxypeptidase 412 507 - -
Seca4g07213 517 Pfam Serine carboxypeptidase 79 507 IPR001563 GO:0004185|GO:0006508
Seca4g07213 517 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Seca4g07213 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Seca4g07213 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 477 490 IPR001563 GO:0004185|GO:0006508
Seca4g07213 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Seca4g07213 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca4g07213 Seca-Chr4 160557780 160566313 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07213 374 510 Calmodulin-binding Proteins AT2G22960 30.657 4.71e-15 71.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07213 K16297 - gmx:100783864 770.385