Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07186 ATGGCCGTTGCTGGAGAAGTTTCACTAGATGAGCATGATATGGATTTTGATCAATTTGGAATACTTATAAAAGTGAAATTCAGACAAAATGGACAGCTTGAAGTTCTCAGTGCCCATCATCAATCTGGAGGGGAACGATCAGTTTCAACTATTGTCTATCTTGTTTCCCTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAACTAGTTAGAGCAGCGAGCAAGCCAAATACACCACAGTGTTTCTTGCTTACCCCGAAGTTGTTACCAGATCTGCAGTATAGTGAGGCATGCAGTATATTAAATGTAATGAATGGCCCTTGGATTGAGCAACCCTCGAAGGTCTGGACTACTGGTGATCGATGGAGCATAATCACGGAACACATTGGAGATACCTTATGTTAA 459 0.4139 MAVAGEVSLDEHDMDFDQFGILIKVKFRQNGQLEVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTTGDRWSIITEHIGDTLC. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07186 152 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 141 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Seca4g07186 152 Gene3D - 1 124 IPR027417 -
Seca4g07186 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 103 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07186 Seca-Chr4 159882059 159883775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07186 1 140 Structural Maintenance of Chromosomes family AT5G15920 86.429 6.28e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07186 K22803 - gmx:100778678 294.278