Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07185 ATGCCTACAACAATTGAGGAATTGGAAGCAGCTATCCAGGATACCACTTCTCAAGCCAATTCAATCCTTTTTGTTAACCATAATATATTGGAACAATATGAGGATCGTCAAAGACAGATAGAAGATCTTGCAGCAAAACTTGAAGCAGACAAGAAGGAATCTAGAAGGTGCATAGCTGAATTAGATAACATTAAGGTCAGTCAAGTGTGA 210 0.3762 MPTTIEELEAAIQDTTSQANSILFVNHNILEQYEDRQRQIEDLAAKLEADKKESRRCIAELDNIKVSQV. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07185 69 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 65 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Seca4g07185 69 Coils Coil 26 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07185 Seca-Chr4 159868332 159868619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07185 1 65 Structural Maintenance of Chromosomes family AT5G15920 61.538 4.72e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07185 K22803 - gmx:100778678 119.783