Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07184 ATGATTGTGATTCTTATGGTCGTGGGTGTGGCAGATGTTCTGGCAACATTAGAGCAAAGACTCAAATCTGAAATTGGGGAGTTTGATTCTCGTGCTTATCAAGCGAGACAGGATAAGTCAAATACAGAAAATGAAATAAAGCTTAAAAAGTCATCCTTGATGCGGTGTAAAGAGAGGATAAAGGAAATGGATAATAAAAGTAACAAGTGTTTGCATGTATTGCAAAAATCTGGGGCTGAAAAAATTTTTGAAGCTTATAAATGGGTCCAGGAACATCGCCATGAATTCAATAAGGAGTCTTTTGTAACACAAGATCCTCGTGACCGGGACCTTTTGGTGAAGAACCTACAGCGATGCTTTGATGTACCCATTTTAAATTATACTGGTAGTGATGAACGCCGAAGAGTGCCTTTCGAAATTTCTGAAGATATGCATGCTCTTGGTATCTACTCTCGGTTGGACCAAATTTTTGATGCTCCCTTTGCTGTCAAGGAGGTTTTGATCAGTCAGTCTAATCTAGACCATTCATATATTGGATCCCAAGAAACTGATCAGAATGCTGTTAAGGTCCCGAAATTGGGAATTATAGATTTATGGACACCAGAGAATCACTACCATTGGTCGAAGTCCAGATATGGAAATCATGTCTCGGCAATGGTTGATCAAGTAGAAAACCCGCGACTTTTATTTAGTAATTTGAATGTGGGAGAAATTGAGAAGCTACGTTCCCAGGAAAGGGAGCTTCAAGAACTCATTGCTACCTTGGAGGAAAGTGTTAAAAAGTATCAAGATGATGAAAGAAGCTCAATGAATCAAGCTGCTAATCATCGTAGACAGTGGGAAGACCTTAGTAATACAGTGAAGAATGAGAAAAAAAGACGGCAAGCTATCATTAGCCGTATTGAACAAAGGAAAGGGATACTGAAATCGATGGATGAGCAGGATGATGTAGATACAGAGATAGCAAAGCTTGTTGATAAGGCTACAAAATGTAACATTCAGCGATTCCATAATGCAATTAAACTTAAGGACATTCTTGTTGAAGCTGTGGGTTACAGACGGAGTTTTGTTGAACAACGTATGGCTTTAATTGAATTTGAAGCAAAGATTGGAGAAATGGAGGCCAATCTAAAGCAGCATGAGAATTTTGCTCTGCAAGCATCATTGTTCTTTGATAAATGTAAAGAAGAGGCTGGGAGTTGTAAACAGAAACTGACTGACTCCTTGAACTACGCCAAATCAATTGCTCGACTTACACCTGACCTAGAGAAGGCATTTCTTGAGCTCAACTGTTCTCGAATTGAAATAGTGTGA 1314 0.3912 MIVILMVVGVADVLATLEQRLKSEIGEFDSRAYQARQDKSNTENEIKLKKSSLMRCKERIKEMDNKSNKCLHVLQKSGAEKIFEAYKWVQEHRHEFNKESFVTQDPRDRDLLVKNLQRCFDVPILNYTGSDERRRVPFEISEDMHALGIYSRLDQIFDAPFAVKEVLISQSNLDHSYIGSQETDQNAVKVPKLGIIDLWTPENHYHWSKSRYGNHVSAMVDQVENPRLLFSNLNVGEIEKLRSQERELQELIATLEESVKKYQDDERSSMNQAANHRRQWEDLSNTVKNEKKRRQAIISRIEQRKGILKSMDEQDDVDTEIAKLVDKATKCNIQRFHNAIKLKDILVEAVGYRRSFVEQRMALIEFEAKIGEMEANLKQHENFALQASLFFDKCKEEAGSCKQKLTDSLNYAKSIARLTPDLEKAFLELNCSRIEIV. 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07184 437 Coils Coil 363 383 - -
Seca4g07184 437 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 19 99 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Seca4g07184 437 Coils Coil 238 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07184 Seca-Chr4 159852025 159859321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07184 14 432 Structural Maintenance of Chromosomes family AT5G15920 44.766 1.19e-119 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07184 K22803 - gmx:100778678 575.474