Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07170 ATGGTGGGGAGGACCAGTATGGTGGTGGCTCACAGGTTGAGCACCATACAAAACTGTGATCTGATTGCTGTGTTGGATAAGGGAAGGGTGGTGGAGAAAGGGACCCACTCATCTTTATTGGGTAAGGGACCAAGTGGTGCTTATTACTCTCTGGTAAGTCTGCGGAGAAGACCAACCAACAGTATTGCTGACTCTGCACAAGAAATTATCTAA 213 0.4742 MVGRTSMVVAHRLSTIQNCDLIAVLDKGRVVEKGTHSSLLGKGPSGAYYSLVSLRRRPTNSIADSAQEII. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07170 70 PANTHER ABC TRANSPORTER B FAMILY 1 54 IPR039421 -
Seca4g07170 70 Gene3D - 2 57 IPR027417 -
Seca4g07170 70 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 53 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07170 Seca-Chr4 159438229 159438441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07170 3 56 Calmodulin-binding Proteins AT2G36910 57.407 9.65e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07170 K05658 - vvi:100854950 112.849