Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07144 ATGGCTTTCAGCTTGTCACTGGCACATCTTATATGTGGGGAGCAGTTAGCTAACCTCATTAATAGCGTCGGTAGAAACTTCGGTGTATTTTTGGGGATGGTGATTATGTGCAATGTTTCACATTTTTTACTAAAGCCCTTTTCACAACCTCGCATTACTTCTGACATAGTTGTGGGACTAATTGTGGGCAACATAAGAGTTGTTCGTGAACTATTTCAGCACTTCAACAAGACATTTGGATATTTAATTGATTTTGGTATGATGTGTTACATGTTTGCATTGGGGATAGAAATGGATCCTTATTTCTTCTTGAAACGACCAGCTAAGCATGCTAAAGTTGCTTATGTAGGTGTTATCTTCACGCTCATTTTAGCAGCTATCACAACCCCAATATTAAAGTACTTCCCAAGTGATAACAACCTATTAGAATTCACATTCTTATTCTCTATTCTTCTTTCTAGCACAGACTCCCCTGTCTTGACCCGTTTAATAACTCAACTCAAAATAGGCAAGTCAGATATTGGGAGGCTTGTAATTGCAGCTGGGATACACTCAGATTTTGTGTGCTTATTGGTCCTTTCCTTTGGCTACATAGCTATTCCATTGCCTAAAATTTGCAATGATTTGGACAAAAAGATTTCCTTTAAAAAGACCCTTTTCATGGGTGGTGCAGTTCTGGGGCAGATAGTCTTCACAGCCATTGTTGCACCATTCTTTATGAATTGGGTTAACAATGCAAACCCAGAAGGCAAACCCATGAAAGGTCCACACCTGGTACTTTCCATTGCCTTCGTGATCATCTTGTGTGCCTCCTCCACTGTGCTTGAGTATAGTCCAATTTTAAGTTCATTCCTGGTAGGGGTTTGTTTCCCCCGGGAGGGAAGAATTTCCAAATGGGTTATCACCAAAATCAATTATATGTTAACCACTTTGTTCTTTCCCATCTTTTTCTTGTGGATGGGGTATGAATGTGATTTCACCCAGTTTGAGCCAGCTTCTTCAGTTACATGGACAAGATTACTTGTCATCATGGTATTGGTAATAGGTGGAAAAGTTGTTGGAACAGTTGTTTCTGGGGCAATGTTGGGCTTTCATTGGCGTGATTCAGTTGCAATAGGATTGCTCCTTGCCATCAAGGGCCATTGGCATATCTACAATGCTATCAAAATGGTAAATCTTTATGTTACTAAGTACTACAATCTGGTGCTCTTTGATTATCAGGTGAATTGTGGTGGTGCAAGTATTTCCACAAGCATTGGGATGATATTCGGAATTTTTTTAACAGTTGTGTTTACCCCAACAGTTGTGGCACATATAATAAAACGTGCAAAGAAAAGGGCACCTTCTCATCGGTTGGCACTCCAATTACTTGACCCATCAAGTGAGCTGAGGATCCTGTTATGCGTTCATGGACCTCAAAATGTTCCTGCTTCCATTAACTTCTTAGAGATCTCAAAAGGGGCAATAGACTCTACAGGTGTTCTGGTATATGTGACAGACATGATTGAACTGACAGATGAAATATCAGCCACATTACAGAAGGATGAAGGAGTGCACACAGCCACTGTCACAAACAAGGAAGTCATGGACATGAGGGACAGAATAACCAACTCATTCCAATCCTATGTCATAGACAATGGTGATGGTATTACGCTTAAAAGAACCATGGCACTCTCAACAATTAACAACATGCCACAAGATATATGTGTTTTAGCTGAGGACTTGATGGTTGCCCTCATCATACTACCATTTCATAGAAGCCAACGTCAGGATGGAACATTGGATGGTGGTAATCAAGGCTTCAGATATGTCAATCGAAAGGTACTAAGAAGTGCCCCATGTTCTGTTGGGATTCTAGTGGACAGAGGCATTGGATCAGTTGAAGGTATATCAAGATGTGAAGTAACACTAAATGTGGCAGTCATATTCATTGGTGGAAAAGATGATAGGGAAGCACTTGTCTATGCAGGGCGTGTAGCACAACATCAAGCAATAAAGCTGACAGTAATAAGGTTCCTAGTAGATAGCAGTGCAGAGACCTCCAGATTAATTGGGTACAAGATCATCCTCCCAGAGCAAGAGAAGGAGATACAATTGGATGATGAATGCTTTGCTCAGTTCTATGAGAGGCATGTGCTTGGAGGCCGTATTTCTTATATGGAGAAGCATCTTGCAAATGCTGCTGAGACCTTCTCTATTCTCAGATCTTTTGAAGGACAATACTCATTGGTCATTGTAGGAAGAGAAGGAGGAATGAACTCTATCTTAACAAGGGGGATGAATGATTGGCAACAGTGCCCAGAACTGGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAATGACTGTCTCTGTGTTGATCATCCAACAACACAAACTTAAAGGAGAAATAGATGGGTTGGATGAAGACTTTTCTATCATGTAA 2430 0.4082 MAFSLSLAHLICGEQLANLINSVGRNFGVFLGMVIMCNVSHFLLKPFSQPRITSDIVVGLIVGNIRVVRELFQHFNKTFGYLIDFGMMCYMFALGIEMDPYFFLKRPAKHAKVAYVGVIFTLILAAITTPILKYFPSDNNLLEFTFLFSILLSSTDSPVLTRLITQLKIGKSDIGRLVIAAGIHSDFVCLLVLSFGYIAIPLPKICNDLDKKISFKKTLFMGGAVLGQIVFTAIVAPFFMNWVNNANPEGKPMKGPHLVLSIAFVIILCASSTVLEYSPILSSFLVGVCFPREGRISKWVITKINYMLTTLFFPIFFLWMGYECDFTQFEPASSVTWTRLLVIMVLVIGGKVVGTVVSGAMLGFHWRDSVAIGLLLAIKGHWHIYNAIKMVNLYVTKYYNLVLFDYQVNCGGASISTSIGMIFGIFLTVVFTPTVVAHIIKRAKKRAPSHRLALQLLDPSSELRILLCVHGPQNVPASINFLEISKGAIDSTGVLVYVTDMIELTDEISATLQKDEGVHTATVTNKEVMDMRDRITNSFQSYVIDNGDGITLKRTMALSTINNMPQDICVLAEDLMVALIILPFHRSQRQDGTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGIGSVEGISRCEVTLNVAVIFIGGKDDREALVYAGRVAQHQAIKLTVIRFLVDSSAETSRLIGYKIILPEQEKEIQLDDECFAQFYERHVLGGRISYMEKHLANAAETFSILRSFEGQYSLVIVGREGGMNSILTRGMNDWQQCPELGPIGDVLSGPDFSMTVSVLIIQQHKLKGEIDGLDEDFSIM. 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07144 809 FunFam Cation/H(+) antiporter 28 24 449 - -
Seca4g07144 809 Gene3D - 29 450 IPR038770 -
Seca4g07144 809 Pfam Sodium/hydrogen exchanger family 33 393 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca4g07144 809 PANTHER CATION/H + ANTIPORTER 34 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07144 Seca-Chr4 158992770 158996861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07144 29 809 Antiporter Super Family AT3G52080 47.362 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07144 K26731 - gmx:100786469 1142.1