Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07138 ATGGCCGCCGTCACCCTCCTTGCCCTAGGGAACGGTTCTCCCGACGTTTTCTCTTCCCTCGCCGCTCTCCGTGCCGGTCAATATCGAACCGGCTTCCGCGCCATACTCTCCACCGGAGCCTTTGTCTCTGCTCTCGTCGTCGGCTTTGTCGCGATCTACGTCGCACCTTTTCCCATCGATCTTGCGCCTTTCGTGAGGGATGTCTTGTTCTACTTGACTGCCGCTTTGTTCCTCTTCTATGTCTATCTTAGTGCTGAGATTTTTCTATGGCAAGCACTTGGATTCGTTGGATTCTATATCTTCTTCGTTGGATTTTTGTTCTATATGGATTTAGGGATGACAGATCACAGGGAAAAGAGTGATGTGGATCTTGAGGGACAAGAGGAATCAAATTTCACCGTCAAAGCTGCGGAATCTTCCCAGGAAGACAAACGCATGGGAAACTGA 447 0.5011 MAAVTLLALGNGSPDVFSSLAALRAGQYRTGFRAILSTGAFVSALVVGFVAIYVAPFPIDLAPFVRDVLFYLTAALFLFYVYLSAEIFLWQALGFVGFYIFFVGFLFYMDLGMTDHREKSDVDLEGQEESNFTVKAAESSQEDKRMGN. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07138 148 Gene3D - 1 133 IPR044880 -
Seca4g07138 148 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 132 - -
Seca4g07138 148 MobiDBLite consensus disorder prediction 122 148 - -
Seca4g07138 148 Pfam Sodium/calcium exchanger protein 2 107 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07138 Seca-Chr4 158555213 158555659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07138 1 145 Antiporters AT1G08960 66.443 1.17e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07138 K13754 - gmx:100775437 209.92