Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07132 ATGGAGGCCGCAGTGGTCGACGCCGGCTCCAGCCTCCTCAAAGCCGGTTTTGCAGTACCCGATCAAACTCCAGCCTTGATAATTCCCACCCAGATGAAACGCATGCTCGATGATGGGTCAGTGACTGATAATCCTTTAGTCGATGATGTTGCCGTTGATCCGGTCGTGAGAGGTTACATCAGAGATTGGGATGCCATCGAGGATTTATTGCATTATGTTTTGTACACTGGCCTTGGATGGGAAATAGGCAATGAAGGGCAAATACTATTTACTGATCCCCTCTGTACTCCCAAGGCTAACAAAGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCCTCGGAACAAGCAGTATTGTCACTATATGCCGTGGGACGTATTTCTGGATGCACAGTTGATATTGGTCATGGAAAAATAGGTACTGTATCTAAAGGAATGAGAATTGTATGA 468 0.4487 MEAAVVDAGSSLLKAGFAVPDQTPALIIPTQMKRMLDDGSVTDNPLVDDVAVDPVVRGYIRDWDAIEDLLHYVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIGTVSKGMRIV. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07132 155 FunFam Actin-related protein 7 4 128 - -
Seca4g07132 155 Pfam Actin 2 145 IPR004000 -
Seca4g07132 155 PANTHER ACTIN 4 148 IPR004000 -
Seca4g07132 155 CDD NBD_sugar-kinase_HSP70_actin 4 146 - -
Seca4g07132 155 Gene3D - 5 122 - -
Seca4g07132 155 Gene3D - 123 148 - -
Seca4g07132 155 PRINTS Actin signature 100 113 IPR004000 -
Seca4g07132 155 PRINTS Actin signature 45 67 IPR004000 -
Seca4g07132 155 PRINTS Actin signature 125 144 IPR004000 -
Seca4g07132 155 SUPERFAMILY Actin-like ATPase domain 2 138 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07132 Seca-Chr4 158266338 158267520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07132 1 148 Cytoskeleton Gene Families AT5G09810 34.783 1.80e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07132 K16615 - gmx:100794153 271.552