Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07131 AACCACATTGCCTCAAGAAGATTTGAATTTGGAGGTACTGAACTTACTAATTTTCTGGCTCAAGAACTTGGCAAATCCAATCCGCTAGTGAATATCAGCATGTCTGATGTTGAGAAAATAAAACAGCAATACTCATGTTGTGCTGAAGATGAATTAGCTTATCAGAAGACCCGAGATTCTTGCCCTGTGGAGACACATACCCTTCCTGATGGACAGGTGATAACAATTGGAAGAGAAAGATATACTGTTGGTGAAGCTTTATTCCAACCATGTCTATTGGGTTTAGAGGCTCATGGCATTGTTGAGCAACTTGTCCGTACTATTTCAACCGTGTCATCTGATAATCATCGGCAACTTCTGGAAAATACTGTGGTTTGTGGTGGCACTTCTTCTATGACTGGTAAATTATTACTTTTGTTAGTTCTGGTGAATCTTGTACATGCTTGA 447 0.396 NHIASRRFEFGGTELTNFLAQELGKSNPLVNISMSDVEKIKQQYSCCAEDELAYQKTRDSCPVETHTLPDGQVITIGRERYTVGEALFQPCLLGLEAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGKLLLLLVLVNLVHA. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07131 148 Gene3D - 4 134 - -
Seca4g07131 148 Pfam Actin 4 134 IPR004000 -
Seca4g07131 148 FunFam Actin-related protein 7 10 97 - -
Seca4g07131 148 PANTHER ACTIN 4 134 IPR004000 -
Seca4g07131 148 SUPERFAMILY Actin-like ATPase domain 4 134 IPR043129 -
Seca4g07131 148 Gene3D Actin; Chain A, domain 4 10 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07131 Seca-Chr4 158254772 158256255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07131 7 134 Cytoskeleton Gene Families AT1G49240 35.606 2.32e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07131 K16615 - gmx:100794153 263.848