Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07130 ATGTTGCTTCTTACTGCAGGTTTTGAAGAGAGATTTCAGAAGGAATCTTGCCTAAGTTCATCCGCTATTCGGCCTACCCTGGTTAAGCCTCCAGAATATATGCCAGAAAATTTAACCATGTATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAATCAGCACGTAACCAAGGCGGACTATGATGAAAATGGGCCTTCCATTGTGCACCGGAAATGCTTCTGA 240 0.4417 MLLLTAGFEERFQKESCLSSSAIRPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHVTKADYDENGPSIVHRKCF. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07130 79 Gene3D - 20 79 - -
Seca4g07130 79 SUPERFAMILY Actin-like ATPase domain 5 79 IPR043129 -
Seca4g07130 79 Pfam Actin 4 79 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07130 Seca-Chr4 158243089 158243955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07130 7 79 Cytoskeleton Gene Families AT3G12110 45.946 1.11e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07130 K16615 - gmx:100814978 148.673