Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07098 ATGATTTCAATTCAAGTTCAAGTATTCCTGATATCAACTCGTGCTGGGTGTCTTGGATTGAGCCTTGTCAGTGCAAACCGTGTTGCAGTATTTGATCCCAATTGGAATCCTGCACAAGACTTACAGGCTCAGGACAAGTCCTTTCGGTTTGGACAAAAGCGGCATGTTTTGGTGTTCCGTCTTCTAGTAGCTGGTTAA 198 0.4394 MISIQVQVFLISTRAGCLGLSLVSANRVAVFDPNWNPAQDLQAQDKSFRFGQKRHVLVFRLLVAG. 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07098 65 Gene3D - 3 65 IPR027417 -
Seca4g07098 65 PANTHER SNF2/RAD54 FAMILY MEMBER 7 65 - -
Seca4g07098 65 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 65 IPR027417 -
Seca4g07098 65 CDD SF2_C_SNF 5 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07098 Seca-Chr4 156955349 156955546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07098 7 63 RAD5 or RAD16-like Gene Family AT1G05120 43.860 1.19e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07098 K20098 - mnt:21393626 109.383