Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07029 ATGGCAGAGAGATGCAGGATTGGGTATGAAGAGCAAAATCAGTGGTATTTATTTAGCCATAAAGATAAGAAGTCAAGAGGGACAATAACTAACAGAGCTATAATGGTTGGGTTCAGGAAGGCAACAGGAAGAGGTAGGGCAATGTATGACAAGATGAAGCTAATTGGGATGAGGAAGACCCTTGTTTAA 189 0.4074 MAERCRIGYEEQNQWYLFSHKDKKSRGTITNRAIMVGFRKATGRGRAMYDKMKLIGMRKTLV. 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07029 62 SUPERFAMILY NAC domain 9 62 IPR036093 GO:0003677|GO:0006355
Seca4g07029 62 ProSiteProfiles NAC domain profile. 1 62 IPR003441 GO:0003677|GO:0006355
Seca4g07029 62 Gene3D NAC domain 1 62 IPR036093 GO:0003677|GO:0006355
Seca4g07029 62 Pfam No apical meristem (NAM) protein 11 62 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07029 Seca-Chr4 148913480 148913668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07029 1 62 NAC Transcription Factor Family AT2G18060 74.603 6.28e-27 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07029 - - pvy:116133911 99.7525