Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06955 ATGAAGGAGCTTTCCATACTTTGTGGTATCCCTACATGCTCAGTCATCTCTGGTCCAGGTGATACTAAGCCTAAAATATGGCCATCCCCTAAAGTGGCTAAACAACTACTAAAGAGGCTTGAGGAAGATCCAAAGGGTGTTAAGTCTAGAAAAGTGGTTACCCAATTGTCTTTTATGCGTGATAAGACAAAAAAGTTAGAAAATCAACTTGCCAGGCTCAAGGAGAGGAACAATGAGAAACATATGTCAATTTTAATGCATCAAATCCATCATGATGGTAAGTCTTTATCTGATTTTGAGCCTAGTGATTTGAAGTGTTTACTTGGTTATGTGGAGCAAAAACTGAACAAAGTTAGAATGAGAACCAAGCATTTTAAACAGGAGTTGCCTCCTAATCCTCCACCACCACCACCAGTGTCTTGTCCTCAAGAAAATGAGGTCCTACAGAAACAATCATCCTTAGATTTGGTGAAAGAGACTGATCAGAATGGTGAAAGTGATGAAGGAAATTATGGAGGTCTCAATGTTGGAAGTGACGCAGGGGTGTTACCTCAAGGCAATTTTGGAGGTCTCAATGGTGAAAGTGATGAAGGCAATTTTAAAGGTCTTAATGTTGGAAGTGACTCATGGGTTTTACCTCAAGACAATTTTGGAGGTCTCAATAGTGAAAGTGGTGTTAGTTCACGGGTATTGCCTAAAGGCAATTTTGGAGATCTTAATGATGGAAGTGATCTCTCAAAGATGTACATTGGAGGTAATTTTGAAGGTCTCAATGGTGAAAGTAATTCAGGGATTCTGAATGGAAGCTCTGCTGATGAAATTGGAGGCAGTAACACATGGCCATCTTATGGACATTTTGAAAGTACAATTGGTGGAAGTTACATGGAAATAGGGCAACATAATGAAAATCAAGGATGGTCCATTAACAACACAGGGATAATTTGTGGTCATCAAAACAACTCTGGAACCAACACTAATGAAGCTGCTATGGGGAGATTCGATGCAAACTTTGTTGGCAATTACAATGGAAATAACTTGAATTTTAGATTGCCTACTCATGGTAATTTTGCTAGTAGCGGTGAATTTGGAAGTGATACTCAAGTGCCTACATCATTTGGAGGAAATTTTCCTTGA 1134 0.3915 MKELSILCGIPTCSVISGPGDTKPKIWPSPKVAKQLLKRLEEDPKGVKSRKVVTQLSFMRDKTKKLENQLARLKERNNEKHMSILMHQIHHDGKSLSDFEPSDLKCLLGYVEQKLNKVRMRTKHFKQELPPNPPPPPPVSCPQENEVLQKQSSLDLVKETDQNGESDEGNYGGLNVGSDAGVLPQGNFGGLNGESDEGNFKGLNVGSDSWVLPQDNFGGLNSESGVSSRVLPKGNFGDLNDGSDLSKMYIGGNFEGLNGESNSGILNGSSADEIGGSNTWPSYGHFESTIGGSYMEIGQHNENQGWSINNTGIICGHQNNSGTNTNEAAMGRFDANFVGNYNGNNLNFRLPTHGNFASSGEFGSDTQVPTSFGGNFP. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06955 377 MobiDBLite consensus disorder prediction 124 143 - -
Seca4g06955 377 MobiDBLite consensus disorder prediction 128 142 - -
Seca4g06955 377 Coils Coil 56 83 - -
Seca4g06955 377 MobiDBLite consensus disorder prediction 159 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06955 Seca-Chr4 146710428 146712284 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06955 1 136 Type I MADS-box Gene Family AT2G40210 30.882 6.14e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06955 - - gmx:106798339 227.254