Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06952 ATGAAGGAGCTTTCCATACTTTGTGGTATCCCTACATGCTCAATCATCTCTTGTCCAGGTGATACTAAGCCTAAAATATGGCCATCCCCTGAAGTGGCTAAACAGCTACTAAAGAGGCTTGAGGAAGATCCAAAGGGTGTTAAGTCCAGAAAAGTGGTTACCCAATTGTCTTTTATGCTGATAAGACAAAAAAGTTAG 198 0.4091 MKELSILCGIPTCSIISCPGDTKPKIWPSPEVAKQLLKRLEEDPKGVKSRKVVTQLSFMLIRQKS. 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06952 65 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Seca4g06952 65 SUPERFAMILY SRF-like 2 56 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06952 Seca-Chr4 146677031 146677228 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06952 3 62 Type I MADS-box Gene Family AT5G48670 38.333 8.03e-10 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06952 - - mtr:120579700 67.0106