Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06936 ATGGATTTGAAGAAAATTCCATTTTATAGTTTATTTGAACATGAATTGAAGATGTATCATTTTAGGCGTCTTAATTTGGCATTTGAATTCTACAATGCTTATGCACAGAAGAGGGGATTTGCTGCTAGAAAGTGGAACGTAGTAAAAAATAAGTGTGGTGAGATCACTCAACGGACTTTTGTTTGTTACAAGGAGGGTTTTAGTAAGAAGAAGCATTTGAAGACAGTTAACCGCAAGAGGGAACCTAGAGCAATGACGAGGTGTAGTTGTGAAGCTTTTTTCTAG 285 0.3614 MDLKKIPFYSLFEHELKMYHFRRLNLAFEFYNAYAQKRGFAARKWNVVKNKCGEITQRTFVCYKEGFSKKKHLKTVNRKREPRAMTRCSCEAFF. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06936 94 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 92 - -
Seca4g06936 94 Pfam FAR1 DNA-binding domain 29 93 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06936 Seca-Chr4 146228735 146229019 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g06936 FAR1 1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06936 - - mtr:112420123 92.4337