Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06907 ATGGCAGCACTGTATGAACCTGTTAGCAGCATCTTTCCTGGTAGGCAAAACTGGAGGTTGAAAGTCAGAGTTGTCCGAGTGTGGGAGATGTTTCCAATTGATGAACCAACTAGGACTTTCTCAATGGAAATGGTTTTGGTTGATAAGATGGGGGGTCAGATTCAGGCGTCAATTCGCAAGCGAATGATGAGGAAGTGCAGTGGCAGTATCATTGAGGGGGAGGCCTACAAGATGCACTACTTTGGATTTGTTCGTAATCTGGGTTCATATAGGGCCACGAAGCATGAGTACAAATTGATCTTTCATTCTAAAACAAGGGTGATCAGGTGCGAGTCTGCTAGCATACCGTTGCATGGCCTTACACTGATGAACACTGAGGATTTTTTGAAAACTAATGGGAAAAGTGACTATCTCGTGGATACGATTGGTGTTCTAACTGCCATATCTGCGGAGAAGCGTTCATTTCGTGACGGGAGGATGACCAGGGTAATGCAGATGGAGTTAACAGATGATAAGGGCAAGGTTTAG 528 0.4508 MAALYEPVSSIFPGRQNWRLKVRVVRVWEMFPIDEPTRTFSMEMVLVDKMGGQIQASIRKRMMRKCSGSIIEGEAYKMHYFGFVRNLGSYRATKHEYKLIFHSKTRVIRCESASIPLHGLTLMNTEDFLKTNGKSDYLVDTIGVLTAISAEKRSFRDGRMTRVMQMELTDDKGKV. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06907 175 Gene3D - 5 112 IPR012340 -
Seca4g06907 175 SUPERFAMILY Nucleic acid-binding proteins 7 113 IPR012340 -
Seca4g06907 175 CDD RPA1_DBD_A_like 19 107 - -
Seca4g06907 175 Pfam Domain of unknown function DUF223 43 113 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06907 Seca-Chr4 145731051 145731761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06907 7 174 Core DNA Replication Machinery Family AT4G19130 21.264 6.14e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06907 - - lja:Lj0g3v0341019.1 177.948