Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06851 ATGGCTGCTCAACTGCAAAAACCTGCGGATGAAATGAACAGGAAGAAGCTTCACGGTGATGCTTCATCGGTTGAACTCAATAATTCCAATATGGTTCCTTCTAAAGGTGCAAGTTCCCCATCTGATGCAAGATCATGTGTATCATCTATAGGAGATGTGGGTGGTAGTGTTAAAGAAGGGGATATGGATCATGAGTACCTTTCCACAGATCAGAATGTTCCTTATCCTGCTGGTGGCTATTATGGGTACTACTATCCAGGTTATGGTGGTTTCTATGGAGAATCAGACAACCAAGGATATTATGTTGGTGCTGATGCCGTGGATCTTCAGTATCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGGATTTCAGACTGGCTACTCTTCATACTTTCCTATGAGTCCAACTGGTGTTGATGGACAGTATGTTGGCCATCATGTCTACCCCCCTGGTTCCATCTTCCAACAACCCATTGGATCACCTGGTTATTTTTCAGCTTCTCTACCTTATGGGGAGTTACTGCCATCAATGTACTCATGGGATCCATCTCTAACCACACAAGATGTGTCACAAGGAAATGCTTATAATGAATTGGCTGGTAAGCCAAATGGTAGATCTAATTTGTCTTCACAGAATCATACAGGTGGTATTTTGTCAAAGTCTGTGCTCCCACCTAACTTGAGCAACCCATCAGAAGTGAAGGGTTCCACACCAATATTGGAGGTCTCATCAACTCATGTTAAGCGTAACCAGCCAAAACAAGCAAACAAGGCTCCCATTTGTGGCTCAGCCCTCCATTCAGATGCTAAGGGTTGCTTGCCTATCACCAAGTTTCCCACATACAATCAAGGCAAGGGTGGATTCCTCTATCCAAACAACTTGCTTAATGCGAAAACAAATACGAAGGCCTGGGTTAGTACTGAAAAGTTGAAGTTCAGAAGCAAGGTTAATGATTCACTTAATGAACAGAATCAGGGTCCTAGAACAGCTAATGCAAAGGGTGCATTATTGTCTGGAGGTAATGCTGCGAGAACCTTGGCTGTAGATGGGAGTGGAAATGGTAACAACAAAATCAGGACAGATCAATATAACCTTCCTGATTTTCCAACCAAATATGATCATGCACTTTTCTTTGTCATCAAATCATACAGTGAAGATGATATTCATAAGAGCATCAAGTATAATGTATGGGCCAGTACTCCTAATGGGAATAAGAGGCTGGATAGTGCATTTCAGGATGCACAGAAGCGAATGGATGAGAAAGGAAGTAAATGCCCTGTATTCCTTTTCTTCTCGGTCAACGCCAGTGGTCAATTTTGTGGAGTAGCTGAGATGACTGGGCGAGTTGATTTCAATAAAAGTATGGATTTCTGGCAACAAGATAAATGGAATGGATATTTCCCTGTAAAATGGCACATTATAAAGGATGTTCCGAATCCTCAGCTCCGGCATATAATTCTCGAGAATAATGATTACAAGCCTGTAACAAATAGCAGAGACACACAAGAGGTGACTTTTCCCCAAGGTGTTGAAATGCTCAATATTTTTAAGAACCATGTGGCAAGAACATCCATATTGGACGACTTTGAATTTTATGAAAGCCGTCAGAAGGTCATGCAGGAGAAAAAAATAAGGCAATCTATGCCCCATACCAATATGCAGCAGCATATAGATGACTTAACCAGTGCACTTGGATCAGTAGACCTATCAGCTGTAAAGAACATGGAGGATCCCAAGTTGGTTGAGAAGGTGAATGACTGA 1776 0.4195 MAAQLQKPADEMNRKKLHGDASSVELNNSNMVPSKGASSPSDARSCVSSIGDVGGSVKEGDMDHEYLSTDQNVPYPAGGYYGYYYPGYGGFYGESDNQGYYVGADAVDLQYPVMQADNGSYVYLMPGFQTGYSSYFPMSPTGVDGQYVGHHVYPPGSIFQQPIGSPGYFSASLPYGELLPSMYSWDPSLTTQDVSQGNAYNELAGKPNGRSNLSSQNHTGGILSKSVLPPNLSNPSEVKGSTPILEVSSTHVKRNQPKQANKAPICGSALHSDAKGCLPITKFPTYNQGKGGFLYPNNLLNAKTNTKAWVSTEKLKFRSKVNDSLNEQNQGPRTANAKGALLSGGNAARTLAVDGSGNGNNKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDSAFQDAQKRMDEKGSKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDYKPVTNSRDTQEVTFPQGVEMLNIFKNHVARTSILDDFEFYESRQKVMQEKKIRQSMPHTNMQQHIDDLTSALGSVDLSAVKNMEDPKLVEKVND. 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06851 591 CDD YTH 382 521 IPR007275 GO:0003723
Seca4g06851 591 MobiDBLite consensus disorder prediction 22 46 - -
Seca4g06851 591 Pfam YT521-B-like domain 382 522 IPR007275 GO:0003723
Seca4g06851 591 Gene3D ph1033 like domains 357 536 - -
Seca4g06851 591 MobiDBLite consensus disorder prediction 1 50 - -
Seca4g06851 591 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 97 557 IPR045168 -
Seca4g06851 591 MobiDBLite consensus disorder prediction 199 241 - -
Seca4g06851 591 ProSiteProfiles YTH domain profile. 380 521 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06851 Seca-Chr4 143449771 143454643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06851 K20102 - gmx:100812429 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06851 4 143449771 143454643 Seca4g06851 4 143449771 143454643 ECH